Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1027 ATGGAAGATGTCAACATATGGCTTTCCTTCTCCATGAATGAGAACCTCAACCATGATTTCGCCATTCGAAGGTTTTGTCCTGCAAGAATAGAAGAGCAAGAGCAAGGAGATCTGAGCCAAGATCATCAAGAACCACCACCAATAGCACCTGATGAAACAGAACTTTCTTCTTCTGATGCTGCCACCACAAGCACTCCATGTCTAGCTTCTTCAGATGTCGATGAATTTGTTGACAGCTTCATCAACATGGACCAGCATGACGATAATGAGTATGCCAATGATGAAGATCAAGAACATCAAGAGAATCATCGTCGTCATCATCAACATGATCAAATTTATGATCACTTCATGGTGAATGATGAAGACGAGGAGGTTGATCCATTCTATATGATGAATGAAGAAGCTTATGGGTATGTTCCAATCACAATGCAGGAAGAAGAAGAAATGGAGATGAAGGGCTCCTTTGGTGCAGAAGAAGAGATGAGCCTTGGTATGGACAAAGGGTTAGATTTGGTTCATTTGCTATTAGCTTGTGCTGAGGCTGTGAGTTGCAGAGACACTCAACAAGCAGACTTGCTGCTCAGAAAAATTTGGTCTTTGGCTACTCCATGTGGTGACTCGTTACAGAGAGTCGCCTATTGTTTTGCTGAAGGCTTGAAGTGTAGATTGTCACTTCTTCCTCACAATGTATCTGCACATGGTACAGTAAAAAACAGTACTACTATAAATGCCTCTTTGGTAACTAGGGAGATGAAGTTGGAAGCTTTTCATCTCCTATACCAAACTACACCATATATAGCTTTTGGTTACAAGGCTGCAAATGAAGCTATATGCCAAGCATCACAAGGGAAATACTCCTTACACATAATTGATCTTGGAATGGAACAAACCCTTCAATGGTCTTCCTTGATAAGGACACTTGCCTCGAGGCCCGAGGGTGCTCCAAGGGTCCGGATTACAGGGTTAATCGACTATGATAATGATGATGAACTGAAACTTCAATCAAGCATGAGTTTGCTTGTGGAGGAAGCAAGCTCCTTTGGGATAGCACTTGAGTTCCACATAATATCAGAGCCAGCAACCCCATCTCTTCTAACGAAGGAGAAGCTGAACTTGAGAGAAGGAGAAACCTTGTTTGTTAATTGCATCATGCACTTGCACAAGTATGTTAAAGAAAGTAGGGGCTATCTCAAGGCAATTCTGCAATCAATCAAGAAGTTAGGTCCTACTGCACTAACTGTAGTAGAGCAAGATTCAAACCACAATGGGCCTTTCTTTCTTGGGAGGTTTCTTGAATCATTACACTATTACTCTGCCATTTTTGACTCACTCGAGGCAAGTATGCCTAGAAATAGCCAGCCGAGGACGAAAATCGAAAGATCATATTTTGCAGAAGAGATTCGCAACATTGTGGCTTATGAAGGGCCTAATAGGATGGAAAGGCATGAGAGTGTAGATCAATGGAGAAGGCAATTGGGAAGAGCAGGGTTTCAAGTCATGGCATTGAAGTGCACAAGTCAAGTAAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACACCGTCCAGTGAGAAGGGTTGTCTTCTGCTTGGGTGGAGAGGAAGGTCAATAATGATGGCTTCTGCTTGGCGAGTTGCAACTTCGTAA 1650 0.4236 MEDVNIWLSFSMNENLNHDFAIRRFCPARIEEQEQGDLSQDHQEPPPIAPDETELSSSDAATTSTPCLASSDVDEFVDSFINMDQHDDNEYANDEDQEHQENHRRHHQHDQIYDHFMVNDEDEEVDPFYMMNEEAYGYVPITMQEEEEMEMKGSFGAEEEMSLGMDKGLDLVHLLLACAEAVSCRDTQQADLLLRKIWSLATPCGDSLQRVAYCFAEGLKCRLSLLPHNVSAHGTVKNSTTINASLVTREMKLEAFHLLYQTTPYIAFGYKAANEAICQASQGKYSLHIIDLGMEQTLQWSSLIRTLASRPEGAPRVRITGLIDYDNDDELKLQSSMSLLVEEASSFGIALEFHIISEPATPSLLTKEKLNLREGETLFVNCIMHLHKYVKESRGYLKAILQSIKKLGPTALTVVEQDSNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQPRTKIERSYFAEEIRNIVAYEGPNRMERHESVDQWRRQLGRAGFQVMALKCTSQVRMMLSVYDCDGYTPSSEKGCLLLGWRGRSIMMASAWRVATS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1027 549 MobiDBLite consensus disorder prediction 87 108 - -
Alju02g1027 549 Pfam GRAS domain family 171 545 IPR005202 -
Alju02g1027 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 544 IPR005202 -
Alju02g1027 549 MobiDBLite consensus disorder prediction 55 69 - -
Alju02g1027 549 ProSiteProfiles GRAS family profile. 162 545 IPR005202 -
Alju02g1027 549 MobiDBLite consensus disorder prediction 33 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1027 Alju-ChrAlju02 7924998 7926647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1027 166 546 GRAS Transcription Factor Family AT1G66350 38.083 6.04e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g1027 GRAS 2e-108 CL0063