Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1020 ATGTCTCTCTCTCTCTCTCTGAGACATGTTCTGTTCTACGTACATAGCATCCATACATATCTCTTCCCTGTTACTGCATTTTTCTGTATCTTGTCTTCTATATATATGCTTAATATATCAGCTTCTGCTTCTTTCTTAGTTTTTGAGCACAGGTTTATCATTGCAATGGCAATCCCTCTAAGCTCTTACTTCAACTGGGAAAACTCTTTCCAAACACTGTTGAACGATCCAGAAATAATGAGCAGTTACTGTCCCTTCTTCCATGAAGAACCACCACCACCACCACCACCAGCAGATTTTTCCGATCAAGAAAGTTTCTTGTTCCTTAATAATGATAATAATCCAAACAATTTATTGTTTGATTATTATTGTTCATTCCCTGCAGAATTAACCTACCCTTCTCCTCCTCTGCCTCAATGTCAAACACCATCACTACCACTCTCTCACTATAACAACAACATTAACATCTTCCCTCAATGTCCTTACCCTAAACGTCGCAAGTTAAGCTTTGAAAATAATTATGATCAGATACCCTATGATGGTGATAATTATTTCTATGATAAAGCTAATATGAATCCCTTGTCTTCTTCCTGTTTAATGCCGGAGTTCAATAATTACGATATTGGAGCTCCGCCACTTGCAGCAGTGCAGCCGCCGGTGTCGGCACAGAGCGTTGCGGCGAGGGAGAGGAGGAAGAAGATAGCAGAGAAGACAGGGGAGCTGGGGAAGATGGTGCCAGGAGGGAGTAAGATGAACACAGCTGACATGCTTCTTGCTGCTTCCATGTATGTCAAGTACTTGCAAGCCCAAGTTTCCATGCTTCAGCTTCTCAACAACACACCCACGGAAGAAAGAGCATCAACTTGGAGTGATAATCAAAATCAACATTTACAATCAATGCTTGGCAGTGAAAGGGTCGAAGAGAAGCTCTATTTGCAGGAAAAGTGCTTAGTCCCACAACACTTGATCACCACCCTCACAGATCATTCTGATATCCAAACAAAACCTTCCATTCTCAAAGATCTTAACCAGCTGATCATTGTCTCCGACCCTGACAAGAAACAACTCTAA 1071 0.4155 MSLSLSLRHVLFYVHSIHTYLFPVTAFFCILSSIYMLNISASASFLVFEHRFIIAMAIPLSSYFNWENSFQTLLNDPEIMSSYCPFFHEEPPPPPPPADFSDQESFLFLNNDNNPNNLLFDYYCSFPAELTYPSPPLPQCQTPSLPLSHYNNNINIFPQCPYPKRRKLSFENNYDQIPYDGDNYFYDKANMNPLSSSCLMPEFNNYDIGAPPLAAVQPPVSAQSVAARERRKKIAEKTGELGKMVPGGSKMNTADMLLAASMYVKYLQAQVSMLQLLNNTPTEERASTWSDNQNQHLQSMLGSERVEEKLYLQEKCLVPQHLITTLTDHSDIQTKPSILKDLNQLIIVSDPDKKQL 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1020 356 Pfam Helix-loop-helix DNA-binding domain 226 268 IPR011598 GO:0046983
Alju02g1020 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 267 IPR011598 GO:0046983
Alju02g1020 356 SMART finulus 224 273 IPR011598 GO:0046983
Alju02g1020 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 280 IPR036638 GO:0046983
Alju02g1020 356 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 221 320 IPR045843 GO:0003700|GO:0006355
Alju02g1020 356 Gene3D - 219 288 IPR036638 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju02g1020 Alju-ChrAlju02 7883094 7885327 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1020 182 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 37.126 1.52e-26 104