Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1008 ATGCCATACCACAAGCACACTCCTCCCATGGCCTCCTCCACCGTCTTGTCTTCTAACCCTAGGGTTTTCTCTTCCACCGTCTCCGATCATCATCCTCATCATCATTGCTGTCCTCTTCCTCAATGTCCCACCGTCCCCAAATCCTTCAGTGGCCTTTGCAAACCTTTCCATTCTCGTGTTCCCACTTCGATTCGCCGTCGAGGCTTCCTCGTCAAGGCTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACGGATTTCCAGAAAAAAGTTCTGTATCTAGAGTCTATTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCAACCGTCATCCCTGCCTCCTCTCTTCCTAATATAAAATCCTCCGTGAAATTCTTTACATCCATGGATTTCTCTGCAATTGAGTTCCGGCGCATTGTTGGCATGTGTCCAGAGATTCTCACATCCAGAATATCAGATATTTTACCTGTCATCACCTTCCTGATCCGCGAAGCTCGCGTGAATGGGTCAGATATCAAGCGTGTCGTAAACCGTCGTCCCAGGTTGCTTGTTTGCAGTGTTACCGAGCAACTTCGTCCCACCCTGTACTTTCTCCAAACCATTGGCATTGAAGAAGTAAACAGGCACACGTACTTGCTATCATGCAGTGTTGAAGAAAAGCTTATTCCCAGGATTGATTACTTTGAGAATATTGGCTTTTCTCGCCGTGATGCGACTACTATGTTCCGAAGATTTCCTCCACTTTTTAACTATAGTATAAAGAACAATTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGCAGAGATCTGAAGGAGCTGAAAGAATTCCCCCAATATTTCTCATTTAGCTTAGAGAGTAGGATCAAACCTAGGCATAAACTTTGTGTAGAAATGGGGGTTTATTTTCCTCTCCCTGTATTATTAAAGACAAACGAATCGCAATTTCGCAATAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTTCAAATTGTGAAGTTGATTAA 1056 0.4328 MPYHKHTPPMASSTVLSSNPRVFSSTVSDHHPHHHCCPLPQCPTVPKSFSGLCKPFHSRVPTSIRRRGFLVKATVIKWRCPKQILPPNCDTDFQKKVLYLESIGIDSFSLIENHPTVIPASSLPNIKSSVKFFTSMDFSAIEFRRIVGMCPEILTSRISDILPVITFLIREARVNGSDIKRVVNRRPRLLVCSVTEQLRPTLYFLQTIGIEEVNRHTYLLSCSVEEKLIPRIDYFENIGFSRRDATTMFRRFPPLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLESRIKPRHKLCVEMGVYFPLPVLLKTNESQFRNRLDVCVNSSTPLKTSPLWCSNCEVD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1008 351 PANTHER CGI-12 PROTEIN-RELATED 107 329 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 Pfam mTERF 78 174 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 Pfam mTERF 174 324 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 Gene3D Transcription termination factor 3, mitochondrial 108 332 IPR038538 -
Alju02g1008 351 SMART mt_12 212 241 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 SMART mt_12 246 278 IPR003690 GO:0003690|GO:0006355
Alju02g1008 351 FunFam Transcription termination factor MTEF1, chloroplastic 168 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1008 Alju-ChrAlju02 7812602 7814874 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju02g1008 mTERF 3.8e-31 No_clan