Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1006 ATGGGAAAAGGAAGAGCTCCTTGCTGTGATAAGAACAAAGTGAAGAGAGGACCTTGGAGCCCTCAAGAAGACCTTAAGCTCATTACCTTCATCCAGAAACATGGTCATCAGAATTGGCGTTCCCTCCCCAAGCAAGCTGGTAGAACAGACAATGAGATCAAGAATGTGTGGCACACCCACTTGAAGAAGAAATTATTATTGAAGAACAGTTCAGATAATAATAACAAGCCCTCCACCATTACTGATCAATCCAATAATAAGCAAGAATCTTCATGCATAACTTCTTCCTCTTCATCTTCTACCTCAACTGGACACCAAGCAGGGACAACATCATCAATTCCTCAGAAGAAAACTACTGACAATATTAATGAGAAAAACTCCGAAAATGTCAATAAAGAGTGTTATACTACTGATCAATCATCATCAGCACCACCTATCTGCAAATTACAAGAGGATCATCATCAGCTGGAACTAGTCGCAGCAGGTTCTTCATTATTGAATCAAGGAGCAGGGCCAGATGATAATAATGATAATAATACAGTAGTAGTACTAAACGAGGTTGTTGTTGACAAGCCAACTAATAATAATAACACCAGCAGTAGTGATGGTTTGCTTGAAATACCATTGGAGGCTGACGATGATTTTTGGAACATGTTGGATGATGACAACATCGGAGCTGGAGAAACTGAAACAATGAAGTATTGGATCAGGGAGATTGAGAAGGATCTTGGATTGGAACCTCAGGCATCATCATCATCGTCCTCTCATGATCTAACCATAGGATTGTTTGATGATATGGACATATGGCCTAATAATGGTAGTTCTGATGGTTTCCGAATCTATTAA 846 0.396 MGKGRAPCCDKNKVKRGPWSPQEDLKLITFIQKHGHQNWRSLPKQAGRTDNEIKNVWHTHLKKKLLLKNSSDNNNKPSTITDQSNNKQESSCITSSSSSSTSTGHQAGTTSSIPQKKTTDNINEKNSENVNKECYTTDQSSSAPPICKLQEDHHQLELVAAGSSLLNQGAGPDDNNDNNTVVVLNEVVVDKPTNNNNTSSSDGLLEIPLEADDDFWNMLDDDNIGAGETETMKYWIREIEKDLGLEPQASSSSSSHDLTIGLFDDMDIWPNNGSSDGFRIY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1006 281 MobiDBLite consensus disorder prediction 65 145 - -
Alju02g1006 281 MobiDBLite consensus disorder prediction 70 120 - -
Alju02g1006 281 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g1006 281 SUPERFAMILY Homeodomain-like 10 68 IPR009057 -
Alju02g1006 281 Pfam Myb-like DNA-binding domain 16 61 IPR001005 -
Alju02g1006 281 SMART sant 15 63 IPR001005 -
Alju02g1006 281 Gene3D - 13 66 - -
Alju02g1006 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 47 - -
Alju02g1006 281 MobiDBLite consensus disorder prediction 128 145 - -
Alju02g1006 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 65 IPR017930 -
Alju02g1006 281 ProSiteProfiles Myb-like domain profile. 11 61 IPR001005 -
Alju02g1006 281 CDD SANT 18 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1006 Alju-ChrAlju02 7798029 7800725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1006 1 124 MYB Transcription Factor Family AT1G56160 41.081 3.85e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g1006 Myb_DNA-binding 6e-11 CL0123