Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0996 ATGATCGACGCTGGATCGACCGCCATGGCCACTTCGCCGTTGAAAAAGATCGAACGCGCCCACCAGCTGTACCGCGACGGGCGGTATGGCGACGCCCTAGGTTTCTACACGGAGGCTATTCGGATGGCTAAGACTAAGGCTCAGAAGATTGCTTTGCATAGCAATAGGGCTGCTTGTTATCTGAAGCTTCAAGATTTCAAGAAGGCTACAGAAGAATGTACCTCAGTCCTTGAGCTGGATCACAAGCATAGTGGAGCATTGATGCTGCGGGCTCAAACACTAGTCACCCTTGAGGAGTACAATTCAGCACTTTTTGATGTCAGCCGGCTCCTAGAGATGGATCCATCCTCAGAGGTGTATCAAAATCTTCAAGCACGCTTAAGGACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGATTGAGGAAGAGGGAGGTGATGAAGATGAGATGACTGTAAAAGGAGATAATAAATGGGAAAAATCCCAAGAGAAAGATGTTGGAAGAAGAGATCAGAAAGATGACCTTGACAAGGCTACTATTACTAATGCTGAAATAGACTTCAAGGTATCATCTGAACAAAGAAGAGAACAAAACTCTAAGCCAAAAACTTCCACGCCAGAGACAATCGCCAAAGCACCACAAGAGGAACCGGCTGAGCAACATTCCAAAGCATGGCAATCAATTCCAAAACCGAAAGGGCATTCAGCTTTAAACTATGCACGATGGGACAGTGTTGAAGATGATTCAAGTGAAGATGATGACAATGATGATGATGAAGATGAAGAAGAATCTCAGCCCCAGTACCGATTTCGTGTAAGAACCATAGGTGTACGATCCGTAAAATGCTTGAATCCTAGGGAAGTACTGGCCTTTCATGGTCAGATGAGTTACCTGACTCTCAAATTGGCATATACTTCATGA 930 0.4516 MIDAGSTAMATSPLKKIERAHQLYRDGRYGDALGFYTEAIRMAKTKAQKIALHSNRAACYLKLQDFKKATEECTSVLELDHKHSGALMLRAQTLVTLEEYNSALFDVSRLLEMDPSSEVYQNLQARLRTQLSLAPIPESEEEIEEEGGDEDEMTVKGDNKWEKSQEKDVGRRDQKDDLDKATITNAEIDFKVSSEQRREQNSKPKTSTPETIAKAPQEEPAEQHSKAWQSIPKPKGHSALNYARWDSVEDDSSEDDDNDDDEDEEESQPQYRFRVRTIGVRSVKCLNPREVLAFHGQMSYLTLKLAYTS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0996 309 MobiDBLite consensus disorder prediction 138 152 - -
Alju02g0996 309 MobiDBLite consensus disorder prediction 133 272 - -
Alju02g0996 309 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 9 284 - -
Alju02g0996 309 MobiDBLite consensus disorder prediction 249 266 - -
Alju02g0996 309 SMART tpr_5 84 117 IPR019734 GO:0005515
Alju02g0996 309 SMART tpr_5 13 46 IPR019734 GO:0005515
Alju02g0996 309 SMART tpr_5 50 83 IPR019734 GO:0005515
Alju02g0996 309 Pfam Tetratricopeptide repeat 64 127 - -
Alju02g0996 309 SUPERFAMILY TPR-like 17 130 IPR011990 GO:0005515
Alju02g0996 309 Gene3D Tetratricopeptide repeat domain 14 146 IPR011990 GO:0005515
Alju02g0996 309 MobiDBLite consensus disorder prediction 153 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0996 Alju-ChrAlju02 7678783 7681216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0996 15 131 Calmodulin-binding Proteins AT3G25230 34.884 2.46e-15 74.3