Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0992 ATGAGAGAGGGTGGTAGATCAAAGCAAGGTACAATGTCGCCATGTGCAGCTTGCAAGCTTCTGAGAAGAAGATGTGCACAGGACTGTGTGTTTGCTCCTTATTTTCCAGCAGATGAACCCCAGAAATTTGCCAGTGTTCATAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTACCGGAGCACCAAAGGAGTGATGCAGTGAGTTCAATGGTGTATGAAGCAAACGCAAGAGTGAGAGATCCTGTTTATGGCTGTGTTGGTGCCATTTCTTCTCTTCAACACCAAGTCGATGTTCTTCAAACCCAACTCGCTCTTGCTCAAGCTGAAGTTGTTCACATGAGATCATTAAGTCAGTTATCTTCTTCACCACCAACAACGACAACTGTGACTGATATGCAGCCTTCCACTTCATCACCAGATCATCATCATCATCATCATCATCACAGTAGCTTCAATAACATAATGTCACCTTCATCGTCAAGGCTAAGTGCCAAGTCCTTTTTTGCCATGGACGTGGGCGAGTCCTTGTGGTCTTGCTAG 552 0.4475 MREGGRSKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLALAQAEVVHMRSLSQLSSSPPTTTTVTDMQPSTSSPDHHHHHHHHSSFNNIMSPSSSRLSAKSFFAMDVGESLWSC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0992 183 Coils Coil 93 113 - -
Alju02g0992 183 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Alju02g0992 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 151 - -
Alju02g0992 183 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Alju02g0992 183 MobiDBLite consensus disorder prediction 119 161 - -
Alju02g0992 183 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0992 Alju-ChrAlju02 7634578 7639035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0992 1 183 AS2 family AT1G31320 63.684 1.02e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju02g0992 LOB 1.4e-43 No_clan