Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0989 ATGGGTGGCGAAGAATTGAGGAATCAAGAAGGGAGCTTTCTGGAAGAAGAGGATGAAGAAGAACTAGAACTTCCAGGGTTTCGGTTTCATCCCACAGATGAAGAACTCGTGGGATTCTATCTTCGAAGACAGCTTGACAAGAAACCAATCAAGATCGAACTCATCAAGCAGATCGATATCTACAAATACGACCCTTGGGACCTTCCAAAAGCGAGCTGCACAGGAGGGGAGAAGGAGTGGTATTTTTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGTATCAGGCCGAATAGAGTAACGGGGTCAGGCTTCTGGAAAGCCACAGGGATAGACAAGCCTGTTGCAGGACAAGGTGGCGAGTGCATTGGCCTCAAGAAGACTCTTGTTTACTACAGAGGCAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCTTCATGACTCCGCCGGCCCCACCAACGCCACCATTGCCCAACAAGCTGTAAGACTTTTCACCGTTCCTTTGTCACATCTATTTGCCTCCTCCTCCAAAATTGAAATCTGGACATTGTGTCGAATATTCAAGCGAAATGTTCCTCCCAGGAAGCACATAACAGACTGGAGATCATCATCATCACATACCAAACGCCAATATTCTTCTGTCGACAAGAACGCGTCAAGCACCGTGGAGATAGATCATACGTCTAATTACTACTCTAATAGCAAAGAAGCCTACATCAATTTTGGAGGAAGCCATAATCATAATCATCATGGTCAACATTATTATTCTCAGCTTAGTCATCATGATGAGCAGAAACCAGCAGTCTTCAATACTATCAGTGATCAAAGGAACAACAACAACAACAATAATAATCAGTTCATGATCATGAACTCATCCCAAGCAGCAGCACAACAACAGCCACAGTTCATTACTGCTTCTTCTTCTAACTTGTGGATTAATAACCCTTCTGCTGCTGCCGCCGCCACCGCCAACGACTTCTTCACGTATGAGAATTGGGATGAACTTGGATCAGTTGTCAAGTTTGCTCTTGATTCCTCTATCATCGAAAAGATGTTAGATCGTTATTCGATTGCTTTCTTGCTGATATTTTCCTGGCACATTGTGGAATTAAATGCAAGCGCTGGTGATGCTAATCCGCATTATAGGGATTGTGTGAAACAATGTGAGGAAACAGGATGTGCAGGGCAAAGATGCTTTGCAAACTGTAAATTTTCTGGAGATGACCTCATGCATGGTCCATGGTACAAGCTAGAGCCACTTTACCTCCAGTGGAAGAAATGGGATTGCCAAAGTGATTGTCGGTACTTTTGTATGGTTGATATAGAGAAAGAAAAAGAATTAAATAATGGTGTTCCAGTCAAATATCACGGTAAATGGCCCTTCAGGCGTATCTATGGGATGCAGGAGCCTGCTTCTGTGGCTTTCTCCGTTCTCAATCTTGCAGCACATTTTCATGGTTGGGTATCCTTTTTCATTCTTTTATACTATAAAATGCCTCTGAAAGATGGGAAGAAGCCTTATTACGAGTATGTTAACTTGTGGCACGCCTACGCACTGTTATCAATGAACTCCTGGTTTTGGAGTGCTGTTTTCCACAGTCGAGACGTGGATTTGACAGAGAAATTAGACTACTCATCTGCAGTGGCTCTCCTGGGATACTCGCTCATTTTGGCCATATTACGAAGTTTCAATGTTAGGGATGAGGCTACCAGGGTTATGATTTCTGCTCCACTAATTGCTTTCGTGGCCAGTCACATATTGTTCATCAACTTTTATAAACTAGACTATGGATGGAATATGAAAGTTTGCGTAGGGATGGCTGTGACCCAACTCATCATTTGGGCTGTTTGGGGTGGTGTTAGCCGCCATCCCTCGCGGTGGAAACTATGGCTGGTTGTTTTTGCAGGTGGCCTAGCAATACTCCTAGAGTTGTATGACTTTCCTCCGTATGAAGGACTTCTGGACGCACATGCTCTTTGGCATGCAACTACTATTCCTCTAACGTATATCTGGTGGAGTTTCATTAGGGATGATGCTGAATTTCAAACCTCGAATGGTGTGAAGAAGGCCAAGTAG 2100 0.4405 MGGEELRNQEGSFLEEEDEEELELPGFRFHPTDEELVGFYLRRQLDKKPIKIELIKQIDIYKYDPWDLPKASCTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVAGQGGECIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSLHDSAGPTNATIAQQAVRLFTVPLSHLFASSSKIEIWTLCRIFKRNVPPRKHITDWRSSSSHTKRQYSSVDKNASSTVEIDHTSNYYSNSKEAYINFGGSHNHNHHGQHYYSQLSHHDEQKPAVFNTISDQRNNNNNNNNQFMIMNSSQAAAQQQPQFITASSSNLWINNPSAAAAATANDFFTYENWDELGSVVKFALDSSIIEKMLDRYSIAFLLIFSWHIVELNASAGDANPHYRDCVKQCEETGCAGQRCFANCKFSGDDLMHGPWYKLEPLYLQWKKWDCQSDCRYFCMVDIEKEKELNNGVPVKYHGKWPFRRIYGMQEPASVAFSVLNLAAHFHGWVSFFILLYYKMPLKDGKKPYYEYVNLWHAYALLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGYSLILAILRSFNVRDEATRVMISAPLIAFVASHILFINFYKLDYGWNMKVCVGMAVTQLIIWAVWGGVSRHPSRWKLWLVVFAGGLAILLELYDFPPYEGLLDAHALWHATTIPLTYIWWSFIRDDAEFQTSNGVKKAK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0989 699 MobiDBLite consensus disorder prediction 212 227 - -
Alju02g0989 699 MobiDBLite consensus disorder prediction 206 227 - -
Alju02g0989 699 Pfam Per1-like family 427 687 IPR007217 GO:0006506
Alju02g0989 699 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g0989 699 PANTHER PER1-RELATED 366 693 IPR007217 GO:0006506
Alju02g0989 699 ProSiteProfiles NAC domain profile. 23 197 IPR003441 GO:0003677|GO:0006355
Alju02g0989 699 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Alju02g0989 699 FunFam NAC domain-containing protein 35 32 200 - -
Alju02g0989 699 SUPERFAMILY NAC domain 24 196 IPR036093 GO:0003677|GO:0006355
Alju02g0989 699 Gene3D NAC domain 32 199 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0989 Alju-ChrAlju02 7580216 7590370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0989 6 197 NAC Transcription Factor Family AT5G39820 55.440 3.22e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g0989 Per1 1.3e-87 CL0192