Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0965 ATGTTATGTGTTTTCGTTTCGGATATAGAAAGGAAAAAAACCGAAATAATGAAAATTTTTAAATTTTGCAGAGAGAAACTGTCTTCATCTTCTTCGTCCTTCGATGTTGAAATTAGTGCAAATCAGAAAGAGACAATTGATTGTCATCAATTAGCAGATCAGACACTGTATCATCAAACTGGAACTTTCTCTGAGGCTTCTCTTTCATTTTCTTACTTGGATGCAAATAATATGAAATACAATATTGATGAGATTGGTGCAGCCATGAACAAGGGCCAATCAGAAGGAGACAAGTGGCTTAGAAGCAGCAAAAAGACCGCCTTACCCCTTCCACAACACATAATAGTTGAGAGAAAGCGAAGACGAGAACTAAACCAGAGGTTCTTGGCTCTCTCAAAAGTGGTACCAGCCATTAACAAGAAGGATAGAGCTTCTATACTGGGAGAAGCAGTGAAGTACATGAAAGACCTTCAAGAACGCATCAAGAAACTGGAGGAGATGAACAAGAAGAAAGTGGTGGAATCCGTGGTTTTTGTTAAGAGTTCATTATCATCATCTTCATCTTCTTCACCATTATCTAGTGGTGGTGGTGGTGGTAATCAACATTATTACAGAAGCCATCAAAATAACATTGATGATGAAGGAGATGATTATTATTATTATTGTAACCCTGGTTACAAAAGGAGGAGGAGTGTAATATTTCCTGAAGAAGAAGAAGAAATAGAAGCAAAAGTGATAGAGAGGAGTGTGCTGATTCGAGTTCATTGTAGGAATAATAATAATAATAATCAGAAGCAGGAAATTCTTGCAACGTTGTTGTCTTCAATTTCGGAGCTTCATTTGATTGTGCTCACTGCTAATGCTCTTCCCTTTGGCAATCACATCGACATCACTGTCATCGCTCAGATGGGAGTCAACTTCCACATGAAGACGAAGGACATTGTGGACCACTTGCGCCTAGCACTATCAAATTTCATTTGA 981 0.3823 MLCVFVSDIERKKTEIMKIFKFCREKLSSSSSSFDVEISANQKETIDCHQLADQTLYHQTGTFSEASLSFSYLDANNMKYNIDEIGAAMNKGQSEGDKWLRSSKKTALPLPQHIIVERKRRRELNQRFLALSKVVPAINKKDRASILGEAVKYMKDLQERIKKLEEMNKKKVVESVVFVKSSLSSSSSSSPLSSGGGGGNQHYYRSHQNNIDDEGDDYYYYCNPGYKRRRSVIFPEEEEEIEAKVIERSVLIRVHCRNNNNNNQKQEILATLLSSISELHLIVLTANALPFGNHIDITVIAQMGVNFHMKTKDIVDHLRLALSNFI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0965 326 MobiDBLite consensus disorder prediction 184 210 - -
Alju02g0965 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Alju02g0965 326 SMART finulus 114 163 IPR011598 GO:0046983
Alju02g0965 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 172 IPR036638 GO:0046983
Alju02g0965 326 PANTHER BHLH TRANSCRIPTION FACTOR 44 323 - -
Alju02g0965 326 MobiDBLite consensus disorder prediction 184 206 - -
Alju02g0965 326 Pfam Helix-loop-helix DNA-binding domain 113 158 IPR011598 GO:0046983
Alju02g0965 326 Gene3D - 111 176 IPR036638 GO:0046983
Alju02g0965 326 Coils Coil 147 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0965 Alju-ChrAlju02 7279156 7285363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0965 88 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.740 2.92e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g0965 HLH 6.4e-10 No_clan