Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0956 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGTGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCTCTCATGATTGATGTTGATCTTAACAAGTGCGAACCATGGGACATTCCTGAGGTAGCATGTGTAGGAGGGAAGGAGTGGTATTTCTATACGCAGAGAGACCGCAAGTACGCCACTGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACAGGGAAGGATAGGCCTATCCTTCGCAAGGGCACTCTTGTTGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCTAAAGGGGGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCTCCTCAACTTTCTTCAGCCAAGGAGGATTGGGTTCTGTGCAGGGCGTTCCTCAAAAACAGAGATCCTTCAGCGAAACAGAGCATCGGAAGCTGCTACGACGACACAGGTTGTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGATCAACAGGCCCAAGCTCAAACTCATCAGGATGATTACGAGCAAGTGCCCTGCTTCTCCATTTTCTCGCAGATCCATACAAACCCTAACTTCAACCACACAAGCAGTACAAGCACTATGGAGCCAAATTTAGTAGTACCTGTCAAGAACCACAGTGTGACCGCCACATACGGCGGAGGAACGACGCCATACGATCTGGATTTGTCTTGCTTGGACCCTAATTTGAACTTCGATGGTGATAGTAGGAAGGTATTGAAAGCTTTCGTGGATCAGCTCGCTAAGATCGAGAGAAATCAACAGAGTCAAATTACTACTCTCAAAGGTTCACCAAGCTTAGGGGAAGCAAGTTCTGAGAGTTTTTTATCTGATGTGTGTATGCCAAACTTGTGGAACACTTTCTGA 972 0.4733 MSSISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEVACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGGKTEWVMHEFRLEGPLGPPQLSSAKEDWVLCRAFLKNRDPSAKQSIGSCYDDTGCSSLPALMDSYISFDQQAQAQTHQDDYEQVPCFSIFSQIHTNPNFNHTSSTSTMEPNLVVPVKNHSVTATYGGGTTPYDLDLSCLDPNLNFDGDSRKVLKAFVDQLAKIERNQQSQITTLKGSPSLGEASSESFLSDVCMPNLWNTF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0956 323 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Alju02g0956 323 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Alju02g0956 323 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Alju02g0956 323 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Alju02g0956 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 222 - -
Alju02g0956 323 FunFam NAC domain-containing protein 100-like 20 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0956 Alju-ChrAlju02 7208055 7212017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0956 2 321 NAC Transcription Factor Family AT1G56010 56.798 4.89e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g0956 NAM 1.6e-36 No_clan