Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0951 ATGACGTGTTGTTTTTCTTTCTTATTTGGTAAGAAGGTTACGTCTTCAGTGATACGAGATCCTGAAATTGATGAAGAATTATCTGGTGTTCACAATGTTATCCTTTATAACTACAAAGAATTAAGTATTGCCACTGAGGATTTCAGTCCAGCCAACAAAGTTGGAGAGGGAGGCTTTGGTTCCGTCTACAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCAGCTGAATCAAGTCAAGGGGTGAATGAATTCTTGACAGAAATCAAAGTGATCTCAGAAATAGAGCATGAAAATTTAGTCAAGTTATATGGCTGTTGTGTGGAAGGCAATCACAGAATATTAGTCTACAATTACCTTGAGAACAACAGTCTAGCACAAACACTTCTAGGTAGACGACACAGCAATATTTTCTTCGACTGGCAAACACGGACTAGAATATGCATTGGGATTGCCCGTGGGCTTGCCTTTCTTCATGAGGAAGTAAAACCACATATTGTTCATAGGGATATAAAAGCAAGCAACATTCTCCTTGACAAAGACCTTACACCAAAGATTTCAGATTTTGGGCTTGCAAAGCTTATCCCACCAAACATGACTCACGTCAGCACACGTGTGGCAGGGACAATAGGTTATCTGGCACCAGAATATGCAGTAAGAGGGCAGGTGAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGTGGGAGATGTAATACAAATACACGATTGCCATTGGAAGATCAATACCTTCTAGAAAGGACATGGAAACATTATCAGGAAAGGATATTGGTAGGGCTTGTAGATATATCCCTAAATGGAGAATTCGATGCTGAGGAGGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGTACTCAGGAAGTTCCAAAGCTCCGGCCATCCATGTCTTCAGTGGTCAAGATGCTCGCTGGTAAAATGGACGTTGATGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTTATGGACCTCAAAGTTGGAGGAAAACCAAAAAATGAAGTTGATATGAAAACATTATCTTCATATAATGCAACCTCGGCCTCGGACAACCAGGACACTACGATGTCGTTTGCTTCAACCGCTACTACTACAACCTTTGCCTTGCAATATGAACATAGCTTGTAA 1179 0.4046 MTCCFSFLFGKKVTSSVIRDPEIDEELSGVHNVILYNYKELSIATEDFSPANKVGEGGFGSVYKGKLKDGKIAAIKVLAAESSQGVNEFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGRRHSNIFFDWQTRTRICIGIARGLAFLHEEVKPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGRCNTNTRLPLEDQYLLERTWKHYQERILVGLVDISLNGEFDAEEACKFLKVGLLCTQEVPKLRPSMSSVVKMLAGKMDVDDSKITEPGLISDFMDLKVGGKPKNEVDMKTLSSYNATSASDNQDTTMSFASTATTTTFALQYEHSL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0951 392 ProSiteProfiles Protein kinase domain profile. 48 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0951 392 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Alju02g0951 392 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 353 - -
Alju02g0951 392 Gene3D Phosphorylase Kinase; domain 1 12 123 - -
Alju02g0951 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Alju02g0951 392 CDD STKc_IRAK 54 319 - -
Alju02g0951 392 FunFam cold-responsive protein kinase 1 124 335 - -
Alju02g0951 392 Coils Coil 390 392 - -
Alju02g0951 392 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0951 392 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Alju02g0951 392 Pfam Protein kinase domain 51 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0951 392 FunFam cold-responsive protein kinase 1 19 123 - -
Alju02g0951 392 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0951 Alju-ChrAlju02 7166005 7169126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0951 24 325 Receptor kinase-like Gene Family AT1G53430 55.776 8.82e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g0951 Pkinase 3.3e-47 CL0016