LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0941	ATGGAAGAAGATACCTTTTTCCCTCCTCCTGATACAGATCTCGACCTCAGCTTCACCAGCACCACCTCCGCCACCACTGACCGGACCTTTGCTTCCTCCAGTGCTCGCACCAGCTTGGCTCGTAGCAGTTTGACTCTCAGCTTCAACGAACGTCTATCCACTGCCTCCACCACCATCGGAACTTCCTCTTCCACACTATTCCTCCGACCGCATCGGGCCTCCGATCCTCACTGGTCTGCCATCAAAGCTGCCACCACTCTTTCTTCAGACGGCGCCCTCCACCTCCACCACCTCAAGCTCCTCCGCCACGTAGGCACCGGGAATCTCGGACGAGTATTCCTCTGCCGACTTCGTGACTACGATCACGCAAACTTCGCTCTCAAGGTTGTGGATAAGGCCTTGCTAAGTAGCAAGAAGCTCTCACATGTGCAAATGGAGGGTCAGATCCTGTCCATGCTAGACCATCCTTTTCTTCCTACGCTCTACGCCCGATTGGAGGTCTCGCATTACACGTGTCTGTTGATCGATTACTGCCCTGGGGGCGACCTCCACTCTCTCCTACGAAAACAGCCCGGAAACAGGCTACCGGTCCAGGCGGTTCGGTTCTTGGCGGCGGAGGTGCTGGTGGCGTTGGAATATTTGCATGCGCTTGGCATCGTGTATAGGGATCTGAAACCGGAGAACGTTCTATTGCGTGAAGACGGCCACGTCATGCTGTCTGACTTTGATTTGTCCTTCAAGGCCGACGTGGTCCCCACATTCGAGTGTCGTGCGGGGCCTCCTAAGAGGAAGAAGCGTGTGTCGTGTAACTGTTTCAGTGGCCGCAGAATGAGATCGCCGGAGCAACTGACCATGGAAGCGGAGTTCGTGGCAGAGCCAAACTCGGCTTTCTCGAGGTCCTGCGTTGGGACGCACGAGTACTTGGCGCCGGAGCTGGTCTCCGGCAACGGCCACGGCAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGTTGTTGTACGGGACGACGCCGTTTAAAGGGTGGAGCAAAGAGAGCACCCTGCGCAATATAGCATCGAGTCGAAACGTGAGCTTCCCCGTGGCGGAAGTAGAGGAAGAAGGAATGGCGGAAGCGAGGGATTTGATTGAGAAACTGTTGATGAAGGACCCAAGGAGAAGACTAGGATGCGCCAGGGGTGCGACGGATATTAAACGGCACTCGTTTTTTGGCGGGATCAAGTGGCCGTTGATCCGAACCTACCGGCCACCGGAGGTTCGTGGGCTAACGACCAAGAAGGGGAGGTTGCACGTGAGCAGTCACGTGACTCATAGGAGAAGAAGATGGTGGTGGAAGGGGCTTGATTATGTTATGAGGAGAAATAGTAAGGGATATAACTTAATCTCAAACTATAGTAATGGTAATTACTATCGTTACGTTAATAGTACTAAGGCTAGTAAGTGTGCTTGA	1455	0.5423	MEEDTFFPPPDTDLDLSFTSTTSATTDRTFASSSARTSLARSSLTLSFNERLSTASTTIGTSSSTLFLRPHRASDPHWSAIKAATTLSSDGALHLHHLKLLRHVGTGNLGRVFLCRLRDYDHANFALKVVDKALLSSKKLSHVQMEGQILSMLDHPFLPTLYARLEVSHYTCLLIDYCPGGDLHSLLRKQPGNRLPVQAVRFLAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLSFKADVVPTFECRAGPPKRKKRVSCNCFSGRRMRSPEQLTMEAEFVAEPNSAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSKESTLRNIASSRNVSFPVAEVEEEGMAEARDLIEKLLMKDPRRRLGCARGATDIKRHSFFGGIKWPLIRTYRPPEVRGLTTKKGRLHVSSHVTHRRRRWWWKGLDYVMRRNSKGYNLISNYSNGNYYRYVNSTKASKCA	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0941	484	Gene3D	Phosphorylase Kinase; domain 1	96	181	-	-
	Alju02g0941	484	Gene3D	Transferase(Phosphotransferase) domain 1	182	249	-	-
	Alju02g0941	484	Pfam	Protein kinase domain	100	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0941	484	ProSiteProfiles	Protein kinase domain profile.	98	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0941	484	FunFam	Serine/threonine-protein kinase OXI1	182	250	-	-
	Alju02g0941	484	SUPERFAMILY	Protein kinase-like (PK-like)	78	421	IPR011009	-
	Alju02g0941	484	FunFam	Serine/threonine-protein kinase OXI1	296	423	-	-
	Alju02g0941	484	PANTHER	FLIPPASE KINASE 1-RELATED	37	423	-	-
	Alju02g0941	484	CDD	STKc_phototropin_like	105	421	-	-
	Alju02g0941	484	Gene3D	Transferase(Phosphotransferase) domain 1	298	423	-	-
	Alju02g0941	484	SMART	serkin_6	98	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0941	484	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	219	231	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0941	Alju-ChrAlju02	7108159	7109613	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0941	1	482	AGC Kinase Gene Family	AT3G14370	65.385	0.0	588

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Alju02g0941		Pkinase	1.9e-53	CL0016