LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0865	ATGCAGCAAGATCGGCCCAAGAAGGATGTTAAAGATTTGGACTTTTTCACTGAGTACGGGGATGCAAATAGATACAAGATTCTTGAAGTTATAGGGAAGGGAAGCTATGGAGTAGTATGTGCAGCAATTGACAGGCACACTGGGGAAAAGGTTGCAATAAAGAAGATTCATGATATTTTTGAGCATATTTCTGATGCCATTAGAATTCTCCGCGAGGTCAAGTTGCTACGGCTATTAAGACACCCTGATATTGTTGACATTAAGCGCATCATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAATTGATGGAGTCCGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACTCGTGAGCACCATCAGTTTTTCCTTTACCAGATGCTACGTGCACTGAAGTACATGCATACTGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATATTGGCAAATGCAAATTGCAAGCTAAAAGTTTGTGATTTTGGACTGGCCAGAGTTGCATTCAATGATGCCCCAACAACAATATTTTGGACAGATTATGTAGCTACAAGATGGTACAGAGCTCCAGAGCTATGTGGATCATTCTTTTCTAAGGACCTGACCCCTGTACTGTGGGCACATATGTGGAGGAAATTAGGCTTGAGCAAGCAATCATAG	684	0.4094	MQQDRPKKDVKDLDFFTEYGDANRYKILEVIGKGSYGVVCAAIDRHTGEKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFFSKDLTPVLWAHMWRKLGLSKQS	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0865	227	ProSitePatterns	Protein kinases ATP-binding region signature.	31	55	IPR017441	GO:0005524
	Alju02g0865	227	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	24	204	-	-
	Alju02g0865	227	FunFam	Mitogen-activated protein kinase	15	119	-	-
	Alju02g0865	227	ProSitePatterns	MAP kinase signature.	60	163	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Alju02g0865	227	Pfam	Protein kinase domain	25	201	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0865	227	SMART	serkin_6	25	219	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0865	227	ProSiteProfiles	Protein kinase domain profile.	25	227	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0865	227	Gene3D	Phosphorylase Kinase; domain 1	23	108	-	-
	Alju02g0865	227	Gene3D	Transferase(Phosphotransferase) domain 1	109	204	-	-
	Alju02g0865	227	FunFam	Mitogen-activated protein kinase	109	217	-	-
	Alju02g0865	227	SUPERFAMILY	Protein kinase-like (PK-like)	21	204	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0865	Alju-ChrAlju02	6495706	6497532	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0865	1	213	MAP Kinase Gene Family	AT1G53510	89.671	4.94e-143	411

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Alju02g0865		Pkinase	2.7e-46	CL0016