Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0845 ATGAAGGTTCTTCTTTTGCATGGATTGCTTCTCTCTCTGCTCTTCATTCAAGTGAAGTCTCTACAGGCAATTTCTGATAAGCTCACAAACGGGAACTGGAAGGTCACACAAACATCTTGCCAGAGCATATCTGGAGAAATACCCAGGGAATTTGGAAATCTCACCCAACTGACTCTAGTGACCCTTTCTGGGAATCGCATTAGTGGTTCGATTCCTGAAGAATTCGGTGAAATTGCAAGTCTGGAGAATTTGGGTTTAGAAGATACTCAGCTTACAGGACCTCTTCCTCAGAGTTTTGGAAATTTGAGGAACTTACGAAGAGTATTTCTTTCTGCAAATAGTTTTACGGGGACAATTCTAGAAACTTTTGGGAATCTGAAGAACCTTTCACTTTTTTTCATGGATGGGAACAACTTATCAGGGAAGATGCCAAGTTTTATTGGGAATTGGACTGAAATTAGTTATCTGGTAATATCTGACTTGAGAGGAACAACAACTATGGCATTTCCTAATTTGAAGAATATGAAGAGTTTGGAACGACTGACTGCTGTTAATTATGGGTACAGTGATTTATCTTACAACAATTTTGCTGAGGCTTCTACATCGAATTGCCAGATCTTACAAGTGAACTTAGCTTCCAGTCTTTCATCTTCAGTAAGAAATGCAACCTTTTGTCTGAAGAAAGGCCTACCTTGTCCAGGAAAACCTCAGTGACCCAAGATGGAGTTTGAGGGGAATGAATATGAAGAAGATCTCAATCAAGATGGCATTTCATACTTCTATGAAAAAGAAAAATGGGCTTATAGCAGCACTGGAACATATATGTATAGTAATAATGCTAATTATATAACAAGTCTAGAAACAAATAAGTTTTCTTTGAATGTTAATGGTTCAGAATACTACAAAACAGCCCGCCTCAGCCCTCAATCACTTAAGTACTATGGCCTATGTATGATGAAGGGTAATTATATGGTGAAGCTCCATTTTGCTGAGATAATGTTCTCTGATGACCAGACATTTAGCAGCCTTGGAACACGCATATTCGATGTTTCAATTCAAGGTATTAAATACTTGGGAGATTTTAATATTGCAAAGGAAGCTGGTGGAGTTGGCAAGGGTATCACAAAGGAATTCGATGTTGATGTGAATGATAGCACCTTGGAGATTCATCTATACTGGGCAGGGAAAGGTACTACTACAATTCCCAACAGAGGTGTATATGGACCTGTAATATCTGCCATTACAGTGGCCCCAAACTTCAAACTTACTTCAAAAGGGTTGCCTGTAGGAGTTATTGTTGGAATTGTGGTTGGATCATGTGCCTTCATTGTACTTGTACTCATTGGCCTCCAAAAGAAGGGTTTCCTTTGTGGGAAAGATTCAAAGGACATAGGTGATATGGGAATTCAAGATATACTATTTTCAACTATCTTAATTTTGATCTCGCTTATCAAAAGGGTCAAATTTGCTAGCAGTGGTGTGTTGTCTGATGGCGTTGCCGTTGCCGTTGCTATTAAGCAACTCTCTTCCAAGTCAAAGCAAGGAAATCGGGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTATGGCTGTTGCATCGAAGGAAATCAATTGTTGCTTGTATATGAATACATGGAGAACAACAATCTTGCTCAAGCACTTTTTGTTCCTACCAGTGGAGTTGGAGTTGAAAACAGAGGAATGAGCCGAGAAAACTGGGGACGCAGGGTTGTACAAAGGTCTGAAACTTCCCTTCTCATTCTCATTTCCCTCCATCAAGTCCTTCTTGTTTCTTCATTCTCTTACTCGAAACAAGCCTTGCTGGTCTTTCAATTAATGGAATTTGCCATTTCAAGCTCTATGCCTTTCTCTGTATTTCTCTTCGGATTTCTTCTGCTAAGTTTCTTCACAGGTTTTCCTTCAAAAGCTCAACTTATACCCCGAGAAGAAGTGGAGGCTTTACAGGCAATATCTGATAAGCTCACAAATGTGAAGTGGAAGGTGACACCAACAACTTGTATTAAAGGAGATGGCTTTAATAACCTCTTTACTTCACCCCCTGCAGTAACCAGGAATGTCACTTGCCATTGCACTTTCCAAAACGGCTCCGTTTGCCACGTCACTAATATACTGTTGAAAAGCCAAAATATAGCAGGAGAAATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATCTCAACTATCTCAATGGCACTATTCCAACGTCTTTTAGGCACATCCCTCTCGTCACTCTGTCCCTTGTAGGGAATCGAATTAGTGGTTCAATTCCCACAGAATTGGGTGAAATTGCTACTCTGAAGGATCTGACCCTTGAAGATAATCAGCTTGGAGGACCTCTTCCTCATAGTCTTGGAAATTTGAGCAACTTACGGAGAATACGCCTTTCTGCAAATAACTTTACTGGAACAATACCAGAAACGTATGGGAATCTGAAGAACCTGATTGATTTTTCTATAGATGGGAGTACCTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGACCAAAATTCTTTATATGGATATGGAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCGTTGTTGACAAATTTGAAAGAGTTGAGAATATCTGACTTGAAAGGAACAACAACTATGGCATTTCCTAATCTGAAGAATTTGAAGAGTTTGGAACGGCTGATATTAAGGAATTGCTTGATTACTGGTCCCATTCCAATGTATATTGGTGAAATGACAAACTTAAAGACTTTGGACCTGAGCTTTAACATGTTTGCTGGCTCAATCCCTGACTCATTTCAGAACTTGAATCTTATTAATCACATGTTTCTGACAAACAATTCTCTGAGTGGAGCAATTCCAGAATGGGTGCTACAGAACAAATATAATATTGATTTATCTTACAACAATTTTACTGAGGCTTCTACATCTAGTTGCCAGATCTTACAAGTGAACTTAGCTTCCAGTCTTTCATCCTCAGTGAGAAATGCAACCTTTTGTCTGAAGAAGGGCCTAACTTGTCCAGGAAAACCTCAGTATTATTCATTGTTCATAAATTCTGGAGGACCCAAGATGGAGTTTGAGGGGAATGAATATGACGAAGATCTCAATCAAAATGGCATTTCATACTTTTATATAAAAGATGACAAATGGGCCTATAGCAGCACGGGAACGTACATATATAATGATAAGGCTAATTATGTAGCCAGTCTACAAACAAATAAGTTTGCTTTGAATGTTAATGGCTCAGAGTACTACCAAACAGCACGGCTCAGCCCTCAATCACTTAATTACTATGGTCTATGTATGATGAAGGGTAACTACAAAGTAACGCTACACTTTGCTGAGATAATGTTTTCTGATGATCAGACATTTAACAGTCTTGGAACTCGCATCTTTGATGTTTCAATTCAAGGTTTTACATACTTGAAAGATTTTAACATTGCCAAGGAAGCTGGTGGAGCTGGTAAGGGCATCACTAAGGTATTTGATGTTGATGTGAATGATACCACCCTGGAGATTCATTTATATTGGGCAGGGAAAGGAACCACAGCTATTCCCACTAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAAATTCCTTCAAAAGGGCTGTCTATTGGAGTTATTGTTGGAATTGTGGTTGGATCAAGTGCCTTCCTTGTACTTGTATTCATTGTCCTCAGAAAAACAGGTTTCATTGGTGGGAAAGATCCAAAAGACAAAGAACTTTTAGATTTGAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACTGCAACCAATGACTTTGACCCTGCAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGTTGTCTGATGGTGTTGCCGTTGCTATTAAGCAACTCTCTTCCAAGTCAAAGCAAGGAAATCGGGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAACATCCAAATCTTGTCAAGCTTTATGGTTGTTGCATCGAAGGAAACCAATTGTTGCTTATATATGAATACATGGAGAACAATTGTCTTGCCCGGGCACTTTTTGGCGATGATAAGCAAGGGATACACTTGGACTGGCCCACAAGAGTGAAAATTTGTCACGGGATAGCGAGGGGATTGGCTTATCTTCATGAGGAGTCAAGGTTGAAGATAGTACATAGGGACATCAAGGCAACAAACATCTTACTTGATAAAGATCTAAATGCCAAAATCTCTGATTTTGGCTTAGCAAAGCTTGATGAACAAGATAATACCCACATTATCACTCGAGTTGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTATTTGACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTCAGTGGAAAGAGCAACGCTAATTGCATACCAATGGACGACTTTGTTCATCTTCTTGATTGGGCCTATGTTCTTCATGAGCAAGGAAAGCTTCTAGAACTGGTGGATCCCCGTCTTGGTTCAAACTACTCTCAAGATGAGGCAATGAGAATGCTCAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACACTTAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGAGGGAAAAGCTCCAATTCAAGCACCAATAAACAAGCACAAAGATCAAGCTGCAAGGTTCAAAGCCTTTGAGATGCTGTCATATGACAGCCAGACATCTATAACCTCTCAGTCTCAAGCAAGTATGGAACAAAGAGGAAAGTCGATGGATGGGCCATGGGTTGACTCCTCAATATCTCTTACAAGTAAGGATGATTTTTCCTCATCAAGTAAGCTTCTTGAAGATTGA 4905 0.3957 MKVLLLHGLLLSLLFIQVKSLQAISDKLTNGNWKVTQTSCQSISGEIPREFGNLTQLTLVTLSGNRISGSIPEEFGEIASLENLGLEDTQLTGPLPQSFGNLRNLRRVFLSANSFTGTILETFGNLKNLSLFFMDGNNLSGKMPSFIGNWTEISYLVISDLRGTTTMAFPNLKNMKSLERLTAVNYGYSDLSYNNFAEASTSNCQILQVNLASSLSSSVRNATFCLKKGLPCPGKPQXPKMEFEGNEYEEDLNQDGISYFYEKEKWAYSSTGTYMYSNNANYITSLETNKFSLNVNGSEYYKTARLSPQSLKYYGLCMMKGNYMVKLHFAEIMFSDDQTFSSLGTRIFDVSIQGIKYLGDFNIAKEAGGVGKGITKEFDVDVNDSTLEIHLYWAGKGTTTIPNRGVYGPVISAITVAPNFKLTSKGLPVGVIVGIVVGSCAFIVLVLIGLQKKGFLCGKDSKDIGDMGIQDILFSTILILISLIKRVKFASSGVLSDGVAVAVAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNNLAQALFVPTSGVGVENRGMSRENWGRRVVQRSETSLLILISLHQVLLVSSFSYSKQALLVFQLMEFAISSSMPFSVFLFGFLLLSFFTGFPSKAQLIPREEVEALQAISDKLTNVKWKVTPTTCIKGDGFNNLFTSPPAVTRNVTCHCTFQNGSVCHVTNILLKSQNIAGEIPSEFGNLTHLTELDLYLNYLNGTIPTSFRHIPLVTLSLVGNRISGSIPTELGEIATLKDLTLEDNQLGGPLPHSLGNLSNLRRIRLSANNFTGTIPETYGNLKNLIDFSIDGSTLSGKIPSFIGNWTKILYMDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMAFPNLKNLKSLERLILRNCLITGPIPMYIGEMTNLKTLDLSFNMFAGSIPDSFQNLNLINHMFLTNNSLSGAIPEWVLQNKYNIDLSYNNFTEASTSSCQILQVNLASSLSSSVRNATFCLKKGLTCPGKPQYYSLFINSGGPKMEFEGNEYDEDLNQNGISYFYIKDDKWAYSSTGTYIYNDKANYVASLQTNKFALNVNGSEYYQTARLSPQSLNYYGLCMMKGNYKVTLHFAEIMFSDDQTFNSLGTRIFDVSIQGFTYLKDFNIAKEAGGAGKGITKVFDVDVNDTTLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKIPSKGLSIGVIVGIVVGSSAFLVLVFIVLRKTGFIGGKDPKDKELLDLKTGYFSLRQIKTATNDFDPANKIGEGGFGPVYKGVLSDGVAVAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGDDKQGIHLDWPTRVKICHGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEQDNTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNANCIPMDDFVHLLDWAYVLHEQGKLLELVDPRLGSNYSQDEAMRMLNLALLCTNLSPTLRPSMSSVVSMLEGKAPIQAPINKHKDQAARFKAFEMLSYDSQTSITSQSQASMEQRGKSMDGPWVDSSISLTSKDDFSSSSKLLED 1634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0845 1634 ProSiteProfiles Protein kinase domain profile. 1288 1565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0845 1634 SMART LRR_typ_2 54 77 IPR003591 -
Alju02g0845 1634 SMART LRR_typ_2 808 831 IPR003591 -
Alju02g0845 1634 SMART LRR_typ_2 102 125 IPR003591 -
Alju02g0845 1634 SMART LRR_typ_2 737 760 IPR003591 -
Alju02g0845 1634 SMART LRR_typ_2 929 952 IPR003591 -
Alju02g0845 1634 CDD STKc_IRAK 1294 1561 - -
Alju02g0845 1634 SUPERFAMILY L domain-like 710 989 - -
Alju02g0845 1634 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1364 1571 - -
Alju02g0845 1634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1410 1422 IPR008271 GO:0004672|GO:0006468
Alju02g0845 1634 Gene3D Phosphorylase Kinase; domain 1 1260 1363 - -
Alju02g0845 1634 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 231 419 - -
Alju02g0845 1634 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1030 1221 - -
Alju02g0845 1634 Gene3D Ribonuclease Inhibitor 10 222 IPR032675 -
Alju02g0845 1634 Pfam Malectin domain 244 414 IPR021720 -
Alju02g0845 1634 Pfam Malectin domain 1032 1216 IPR021720 -
Alju02g0845 1634 SUPERFAMILY Protein kinase-like (PK-like) 1273 1588 IPR011009 -
Alju02g0845 1634 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1260 1363 - -
Alju02g0845 1634 Gene3D Ribonuclease Inhibitor 895 1008 IPR032675 -
Alju02g0845 1634 Gene3D Ribonuclease Inhibitor 659 826 IPR032675 -
Alju02g0845 1634 Gene3D Ribonuclease Inhibitor 827 894 IPR032675 -
Alju02g0845 1634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 37 566 - -
Alju02g0845 1634 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 488 553 - -
Alju02g0845 1634 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 900 991 - -
Alju02g0845 1634 SUPERFAMILY Protein kinase-like (PK-like) 499 567 IPR011009 -
Alju02g0845 1634 Gene3D Phosphorylase Kinase; domain 1 490 555 - -
Alju02g0845 1634 Pfam Protein tyrosine and serine/threonine kinase 1292 1559 IPR001245 GO:0004672|GO:0006468
Alju02g0845 1634 Pfam Protein tyrosine and serine/threonine kinase 498 564 IPR001245 GO:0004672|GO:0006468
Alju02g0845 1634 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 656 892 - -
Alju02g0845 1634 Gene3D Transferase(Phosphotransferase) domain 1 1364 1576 - -
Alju02g0845 1634 MobiDBLite consensus disorder prediction 1593 1634 - -
Alju02g0845 1634 SMART serkin_6 1288 1559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0845 1634 SUPERFAMILY L domain-like 32 196 - -
Alju02g0845 1634 Gene3D - 1030 1221 - -
Alju02g0845 1634 Gene3D - 234 419 - -
Alju02g0845 1634 FunFam Leucine-rich repeat receptor protein kinase EMS1 29 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0845 Alju-ChrAlju02 6285318 6302054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0845 42 564 Receptor kinase-like Gene Family AT1G53440 43.348 7.69e-146 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g0845 PK_Tyr_Ser-Thr 9.6e-50 CL0016