Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0813 ATGTCGCATTCTGAGAAGCCCGATTCGGAGCTAGGGTTAGATGCTCTCCGCGAACGATTTCGCGAATCCGTGTGCTGCGAGGCAAACAAGCCGGATTTTCGCGAGCTCGATCTTGGGTCGCCGGTTTCGCCATTGCGGACACGTCAGAGTGGACCTGCTGCGAGTGGACTCACCACTACCACCAGCAGCAGTTCCAGTTCATCTGGATCGGTTTCTGGGCGCCATGGGCGCAACCCGGTCTCGAAAAGATCCGATTCTGGCGCGAACAACAACTCCGGTGAGCTTTCAGGTTCCAGCGAGAGCAGTCCTACTGCCGCCGAGAGCCTTCGATCTGGGGGTAATGCCAGGAACTTCAAACCGGGTTACGCAAGATCCGATGCCGGAACCACACCACCTCTAATCTATTCGGGTCAAAGCTCTTCCGTCACATCACCGGCGTTGAATGTTCTTCCTACCGGCAATATCTGTCCGTCTGGCAAGATTCTGAAGACGGGCATGGCATCTAATCGGACCACCAGGACGGACGTTTTGGGCTCCGGTACGGCCAATTATGGCCACGGAAGCATAATGCGGGGCGGGGGAACATCCAAACACTCTGCCGGAGAGGCGGCAAGTACGGCAAATGCAAGGGCGACTGGTGGTGGCGGGTTCAAAGAACCGTTCAAGAAATCGGTGGCAGGTTTGGATCCAGAAGATGTAAAGAGAGCGGCGAACGACCAGTATAAGAGGGGTAACTTTACGGAGGCATTGAGTCTTTACGATCTGGCAATTGAAGTGTCCCCAGGTAATGCTGCCTACCGTAGCAACCGTGCGGCTGCATTGACGGGATTGGGTCGGTTGACTGAGGCGGTGAGGGAATGCGAGGAGGCTGTGAGATTGGATTCTAGTTATGGAAGAGCACACCAGCGTCTTGCTTCTCTTTTTCTCCGGTTAGGACAAGTTGAGAATGCGAGGAAGCACCTATTCGGTCATGGGCTGCAGCCGGATCCTTCTGAGTTGCAAAAGCTACAATCGGTGGAGAAGCATATCAACAAATGTACTGATTTCAGAAGGATAGGTGATTGGAAAAGTACCCTCAGGGAAGTTGATGCTGCTGTTGCTGCTGGAGCAGACTCTTCTCCTCAGCTCTTTATGTGTAGAGCGGAAGCCCTCTTAAAGCTCCACCAAATTGATGATGCCCGATCGATTATGTCAGCTATTCCAAAAACAGAATCACATTCTAAAACCTCATCTCAGGCAAGGTTTTTTGGGATGCTTTCTGAAGCTTATTCTTTCGTTGTTAGAGCTCAGATTGAGATGGCCTTGGGAAGGTTTGAGAATGCAGTTACAGCTGCCGAGAAAGCTGGCCTGATTGATCCCCGGAACATTGAAGTTGCGGTTTTGCTCAGTAATGTAAGGATGGTGGCCAGAGCTCGAGCTCGTGGAAATGATCTTTTCAAATCTGAAAGGTTCACTGAGGCTTCCTCTGCATATGAGGAAGGTTTAAGGCTGGACCCTTCAAATGCTGTTCTCCATTGCAATAGAGCTGCTTGTTGGTTTAAGCTTGGGGGATGGGAAAGATCAATTGAGGACTGCAATCAAGCTTTACACATCCAACCAAATTACACAAAGGCCCTTCTTCGAAGGGCTGCCTCAAATAGCAAGCTGGAAAGGTGGGAAGAAGCAGTCAAAGATTATGAAATCTTACAAAGAGAACTTCCAGATGACAATGAAGTTGCTGAAGCGCATTTCCATGCGTACGTTGCATTAAAGAAATCTCGCGGGGAAGAAGTTCATAATTTGAAATTTGGTGGTGAAGTGGAAGGAGTATCTGGTCTTGAGCACTTTAGAGCTGCAATTTCTTTACCAGGTGTATCTGTTGTCTATTTTGAAGTTGGATCTGACTCGCAATGCAAACAATTATCACCATTTGTGAATACACTGTGCAGTCGATATCCTTCTGTTAACTTCCTCAAGGTGGATATTCAAAAAAGCCCAGCAATTGCAGCCGCTGAGAATGTTAGGTTGGTACCGACTTTCAAGATCTACAAAAATGGCAGCCGTGTGAAGGAAATTGTTTGCCCCAGCCGTGATATGTTGGAACACTCTGTGAGGCATTACAGCACTTAG 2109 0.4917 MSHSEKPDSELGLDALRERFRESVCCEANKPDFRELDLGSPVSPLRTRQSGPAASGLTTTTSSSSSSSGSVSGRHGRNPVSKRSDSGANNNSGELSGSSESSPTAAESLRSGGNARNFKPGYARSDAGTTPPLIYSGQSSSVTSPALNVLPTGNICPSGKILKTGMASNRTTRTDVLGSGTANYGHGSIMRGGGTSKHSAGEAASTANARATGGGGFKEPFKKSVAGLDPEDVKRAANDQYKRGNFTEALSLYDLAIEVSPGNAAYRSNRAAALTGLGRLTEAVRECEEAVRLDSSYGRAHQRLASLFLRLGQVENARKHLFGHGLQPDPSELQKLQSVEKHINKCTDFRRIGDWKSTLREVDAAVAAGADSSPQLFMCRAEALLKLHQIDDARSIMSAIPKTESHSKTSSQARFFGMLSEAYSFVVRAQIEMALGRFENAVTAAEKAGLIDPRNIEVAVLLSNVRMVARARARGNDLFKSERFTEASSAYEEGLRLDPSNAVLHCNRAACWFKLGGWERSIEDCNQALHIQPNYTKALLRRAASNSKLERWEEAVKDYEILQRELPDDNEVAEAHFHAYVALKKSRGEEVHNLKFGGEVEGVSGLEHFRAAISLPGVSVVYFEVGSDSQCKQLSPFVNTLCSRYPSVNFLKVDIQKSPAIAAAENVRLVPTFKIYKNGSRVKEIVCPSRDMLEHSVRHYST 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0813 702 ProSiteProfiles TPR repeat profile. 468 501 IPR019734 GO:0005515
Alju02g0813 702 SUPERFAMILY Thioredoxin-like 506 699 IPR036249 -
Alju02g0813 702 Pfam Tetratricopeptide repeat 236 295 - -
Alju02g0813 702 Pfam Tetratricopeptide repeat 473 534 - -
Alju02g0813 702 FunFam TPR repeat-containing thioredoxin TTL4 594 701 - -
Alju02g0813 702 Gene3D Tetratricopeptide repeat domain 229 588 IPR011990 GO:0005515
Alju02g0813 702 SUPERFAMILY TPR-like 230 458 IPR011990 GO:0005515
Alju02g0813 702 CDD TRX_family 607 694 - -
Alju02g0813 702 MobiDBLite consensus disorder prediction 27 137 - -
Alju02g0813 702 SMART tpr_5 536 569 IPR019734 GO:0005515
Alju02g0813 702 SMART tpr_5 230 263 IPR019734 GO:0005515
Alju02g0813 702 SMART tpr_5 264 297 IPR019734 GO:0005515
Alju02g0813 702 SMART tpr_5 502 535 IPR019734 GO:0005515
Alju02g0813 702 SMART tpr_5 468 501 IPR019734 GO:0005515
Alju02g0813 702 SMART tpr_5 422 455 IPR019734 GO:0005515
Alju02g0813 702 MobiDBLite consensus disorder prediction 43 111 - -
Alju02g0813 702 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 19 699 IPR044534 -
Alju02g0813 702 Pfam Thioredoxin 612 693 IPR013766 -
Alju02g0813 702 Gene3D Glutaredoxin 596 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0813 Alju-ChrAlju02 6001693 6004824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0813 244 592 Glycosyltransferase AT3G04240 22.222 2.69e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0813 02 6001693 6004824 Alju10g1114 10 11151253 11154581 CCT
Alju02g0813 02 6001693 6004824 Alju02g0813 02 6001693 6004824 ECH