Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0803 ATGCAAATTGATGACACTACTACTTTCTTTGAAAGAGTGGGACGAGGCTATCCGAGATTCTTGCTGCGTCTCGACTCTCATTGCTTTCAACCGGAGATGATTAGCGCCGGATTAGGCAGTCTCCGAATGTGTTGCTTGCATCTCCCTTGCTTCTCAGACAAATCTCTACTCCGACCAGCTCGGTTCTCTTTCACTTGCCACCGCCACTGCCGCCTTTTGGCCACCGCATCCTCGGTTTCTGGCGCCAATAAGAAGGAAACGAAGGAGAAGGTCATCGTCATATCTGGCCCCACTGGGTCTGGTAAAAGCCGGCTTGCTTTAGAGCTCGCGAAGCGCCTCAATGGTGAAATTATCAGTGCGGATTCTGTCCAGGTGTACCAGGGTCTTGATGTTGGATCAGCAAAGCCCTCCAAAAATGATAGAAAGGAGGTACCACATCATCTGGTTGACATATTGCACCCATCGGAAGATTATTCTGTTGGGCAATTTTTTGAGGATGCAAGGCAAGCTACGAGGTGTATTCTTGACAATGGTCATGTTCCTATTGTTGTTGGGGGAACTGGATTGTACTTAAGATGGTTCATGTATGGAAAGCCTGATGTCCCCAAGGCCTCTCCAGAGACTACATCTGAAGTGTATTTGGAGTTAGCTGAATTACAGAGAAATAAGCAATGGGATGCAGCTGTACAGTTGGTTGTAGAAGCAGGTGAACCAAAGGCCCAATTTATAACTCCCAATGATTGGTATCGATTGCGACGTAGCCTTGAGATTATTAAGTCTAGTGGATCACCTCCGTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGGACATTCTAGTGCTATGGACAACTCCAACTATTCTGATGCCAATGCTTTTTCCGGTGGAATGAAAGAAACATCCTCAGATTTGGACTACGAGTTCATTTGTTTTTTCCTTTCCACGCGAAGGCTTGACCTCTATAGATCAATTGATTATCGCTGTGAAGATATGCTATTAGAGAGGGATGGGATATTGTCTGAGGCTCAATGGCTTCTTAATATTGGTCTTCATCCTAATTCAAATTCTGCAACAAAAGCAATTGGTTACAGGCAGGCCATGGACTACTTAGTAAGATGCAAACTGCAAGGAGGTCAGAGTTCAGTTCGAGAATTCTTCAATTTTTTACATGAATTTCAAAAGGCATCTAGGAACTTTGCCAAAAGACAATTGACTTGGTTTCGAAATGAACTTATATACCACTGGCTTGATGCTTCTAAACCTCTGGACACCATTCTAGACTTTATACATAGATCCTACCATGAGAACAGTGGAGCTCTCATTGTTCCTGAACACTTGAGAATGTCTAGAGATGCTTCTAACAGTCGAGAAGCTAATGAACTAAAGGCTTACCACAGCAAAAATAGGCTTTTCTTGAATAAAGAGGATTGCATTCCTGTTCTGAACTGGATAAGAACTCAAAGCTGA 1473 0.4372 MQIDDTTTFFERVGRGYPRFLLRLDSHCFQPEMISAGLGSLRMCCLHLPCFSDKSLLRPARFSFTCHRHCRLLATASSVSGANKKETKEKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQGLDVGSAKPSKNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRCILDNGHVPIVVGGTGLYLRWFMYGKPDVPKASPETTSEVYLELAELQRNKQWDAAVQLVVEAGEPKAQFITPNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGHSSAMDNSNYSDANAFSGGMKETSSDLDYEFICFFLSTRRLDLYRSIDYRCEDMLLERDGILSEAQWLLNIGLHPNSNSATKAIGYRQAMDYLVRCKLQGGQSSVREFFNFLHEFQKASRNFAKRQLTWFRNELIYHWLDASKPLDTILDFIHRSYHENSGALIVPEHLRMSRDASNSREANELKAYHSKNRLFLNKEDCIPVLNWIRTQS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0803 490 Hamap tRNA dimethylallyltransferase [miaA]. 91 429 IPR018022 GO:0008033
Alju02g0803 490 Gene3D - 88 478 IPR027417 -
Alju02g0803 490 Gene3D - 200 270 - -
Alju02g0803 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 218 IPR027417 -
Alju02g0803 490 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 88 421 IPR039657 -
Alju02g0803 490 Pfam IPP transferase 124 412 - -
Alju02g0803 490 FunFam tRNA dimethylallyltransferase 9 199 270 - -
Alju02g0803 490 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 91 268 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0803 Alju-ChrAlju02 5919672 5929579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0803 94 372 C2H2 Transcription Factor Family AT2G27760 28.028 2.67e-20 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0803 02 5919672 5929579 Alju02g0803 02 5919672 5929579 ECH