Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0771 ATGGCTCCCCGAGACCCACCCATCTCTGTCGCCGCACCCAACGGCGCCACCCTTGCCGCCAAGGAGATCCGCTATCGCGGCGTCCGGAAGAGGCCCTGGGGGCGTTATGCCGCCGAGATCCGTGACCCCGGCAAGAAAACTCGCGTTTGGCTTGGCACTTTCGACACCGCTGAGGAGGCGGCGCGTGCCTACGACGCCGCCGCACGAGAGTTCCGTGGACCCAAGGCCAAGACTAATTTCCCCACTCCTTCTGAGCTTGTAAATAACACCAACAACCCTACCCGCAGTCCTAGCCAGAGCAGCACCCTCGATTCTTCCTCTCCGCCTCCACCGCGGCCGCCGTTAGACCTTAGCCTCACTCCGCTTTCTGCCGGCTTCGGTGTTATGGGGTTTCCGGTCATCCCCGTGGCCCGCCCTGTTGTGTTTTTCGATGCGTTTGCGAGGGCTGATAACATGAGAAGCGTTGCCCGCCGCGAGATGTGCAAGTTTGACCGCCCGGTGACCGATTTACGTCCCGCCGCCGGTATTGGGCAGAGCGACTCCGACTCGTCCTCTGTCGTGAACTACGAGCTTGCTCCACGGCCTCGGAGGCTTCTGGATCTTGACCTTAACCTTGCTCCTCCTGCGGAGGTTGCCTGA 639 0.6197 MAPRDPPISVAAPNGATLAAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGPKAKTNFPTPSELVNNTNNPTRSPSQSSTLDSSSPPPPRPPLDLSLTPLSAGFGVMGFPVIPVARPVVFFDAFARADNMRSVARREMCKFDRPVTDLRPAAGIGQSDSDSSSVVNYELAPRPRRLLDLDLNLAPPAEVA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0771 212 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Alju02g0771 212 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Alju02g0771 212 MobiDBLite consensus disorder prediction 74 118 - -
Alju02g0771 212 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 186 - -
Alju02g0771 212 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Alju02g0771 212 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Alju02g0771 212 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0771 Alju-ChrAlju02 5699892 5700530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0771 20 144 AP2-EREBP Transcription Factor Family AT3G15210 62.857 1.19e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g0771 AP2 6.8e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0771 02 5699892 5700530 Alju03g1297 03 41559230 41559925 ECH
Alju02g0771 02 5699892 5700530 Alju02g0771 02 5699892 5700530 ECH