Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0766 ATGGAAAGGAAACGACCATTCACTGAGAAGTCAAAGGACAAAGTTATTGAAGAAGCAGAAGATGAAGAAGAGGAAGAAGATGAAAGGAAGGGTGGTATTGGTGGTGGTCATGTTGCAGAAGAAGAAAAGAAGAAAGGGGTTGGTGGGAGTAACAGAAGAGGATCAAGTGGTGGTTATAAAGTTTCTTCAGCTTCCTGTCAAGCAGAGAGGTGTGGAGCTAACTTGGCTGATGCAAAGAGATACCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCGCCTGTTGTGATCGTTGCAGGGCTGAGGCAGCGGTTTTGCCAGCAATGTAGCAGGTTCCATGACATAGGGGAATTTGATGAGGCGAAGAGGAGCTGTCGGAGGAGATTGGCGGAGCACAATGAGAGGCGGCGGAAAAGCAATGCTGAAACTCACAACGATGGTGCTGAAGATCATCGTCATCAGAACTCAATAGAATTGCGTTTCAGGGATGTTGATGACAGGGGAAGAAGAGTGAATCAGAGGGACGTTAATTGTGGGAATTGGAGCAGCAAGTCTTTCCATATCAGATAA 573 0.466 MERKRPFTEKSKDKVIEEAEDEEEEEDERKGGIGGGHVAEEEKKKGVGGSNRRGSSGGYKVSSASCQAERCGANLADAKRYHRRHKVCEFHSKAPVVIVAGLRQRFCQQCSRFHDIGEFDEAKRSCRRRLAEHNERRRKSNAETHNDGAEDHRHQNSIELRFRDVDDRGRRVNQRDVNCGNWSSKSFHIR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0766 190 SUPERFAMILY SBT domain 65 144 IPR036893 GO:0003677|GO:0005634
Alju02g0766 190 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 48 142 IPR044817 GO:0003677
Alju02g0766 190 Coils Coil 123 143 - -
Alju02g0766 190 MobiDBLite consensus disorder prediction 130 161 - -
Alju02g0766 190 MobiDBLite consensus disorder prediction 1 17 - -
Alju02g0766 190 MobiDBLite consensus disorder prediction 29 49 - -
Alju02g0766 190 MobiDBLite consensus disorder prediction 1 61 - -
Alju02g0766 190 Gene3D - 57 127 IPR036893 GO:0003677|GO:0005634
Alju02g0766 190 FunFam Squamosa promoter-binding-like protein 14 57 127 - -
Alju02g0766 190 Pfam SBP domain 66 139 IPR004333 GO:0003677
Alju02g0766 190 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0766 Alju-ChrAlju02 5655208 5655993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0766 57 143 SBP-box Gene Family AT2G33810 66.667 8.03e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju02g0766 SBP 1.2e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0766 02 5655208 5655993 Alju03g1286 03 41441855 41443345 ECH
Alju02g0766 02 5655208 5655993 Alju02g0766 02 5655208 5655993 ECH