Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0743 ATGAAGAAGAGAGCTTTGTGTAAAAAGCAGAGAGCCATAGAAGCTGCCCAAAATTTCATACCAAAAGAACCATTCTTTACTGCAGTAATAAAACCACCAAACCTGATTCACCATTATATGGATGTGCCTGGCACATTTTTGAGCCGTTATCTGGGTAAAACTGATTATGTGAATCTCCAGGATTGTAGTGGAAAATGTTGGGCGGTTAATTGTAGTAAACACACTTCTTATCCAACTGTTCGAATGGGGGGCTGGATCGATTTCACTAGGGCCAACAATCTGAAGGAAGGAGACAAACAACAAACGCATGAAATGGCTGATCAACTTGCAGATTCGCTCCCAACCGTCATATCGGGAGACGACATTTTTGGTGATTCTCTTCAAACCAATCAATACACAGTCACATTCGATCTTCGAACCTCCATCATCATCGGCTTCTCCGTCTCACTCTTCTTTTGTGTCGTCTACCACATCCTCTGCAGCTTCTTCTACCGGCTCATCGACACCAGGATTGACTATCATCACGGTGGCGATGTCAGCCCCGGCACTGATGGCGGAGGCGGTGACATGTCGCGGTCGCATCACCATGTGGCGATGTATCAGGCTCTGGTTCTCAGCAACATGCAGGCCTGGGTAATGGTGGGAGCAAGAATGGAGGAATCTGCCGAGAACGTGGACAAGAGAAGAGGGGAAACTCTGAGGGCGATGAAGAAATTGCCGGCGTTGGTGAAGTTTGGAAGCGAGCATGATGAGAATAATAATAACAATGTGGCGAGAAATTGTGAGGATTGTGTGATATGCTTGGAGGATTTTCAGGTTGGAGAGATGTGTCAGATTTTTCCTGGATGCAATCATGTGTTTCATTCGAATTGCATTGACTGTTGGTTGGCCACCAAGCTTACGTGCCCAACTTGTCGGAGTAACATTACGTAA 933 0.4609 MKKRALCKKQRAIEAAQNFIPKEPFFTAVIKPPNLIHHYMDVPGTFLSRYLGKTDYVNLQDCSGKCWAVNCSKHTSYPTVRMGGWIDFTRANNLKEGDKQQTHEMADQLADSLPTVISGDDIFGDSLQTNQYTVTFDLRTSIIIGFSVSLFFCVVYHILCSFFYRLIDTRIDYHHGGDVSPGTDGGGGDMSRSHHHVAMYQALVLSNMQAWVMVGARMEESAENVDKRRGETLRAMKKLPALVKFGSEHDENNNNNVARNCEDCVICLEDFQVGEMCQIFPGCNHVFHSNCIDCWLATKLTCPTCRSNIT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0743 310 ProSiteProfiles Zinc finger RING-type profile. 264 306 IPR001841 -
Alju02g0743 310 SMART ring_2 264 305 IPR001841 -
Alju02g0743 310 Pfam Ring finger domain 263 306 IPR001841 -
Alju02g0743 310 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 135 309 IPR044675 -
Alju02g0743 310 SUPERFAMILY DNA-binding pseudobarrel domain 21 98 IPR015300 -
Alju02g0743 310 Gene3D - 6 100 IPR015300 -
Alju02g0743 310 CDD B3_DNA 24 98 IPR003340 GO:0003677
Alju02g0743 310 SUPERFAMILY RING/U-box 263 309 - -
Alju02g0743 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 310 IPR013083 -
Alju02g0743 310 Pfam B3 DNA binding domain 25 98 IPR003340 GO:0003677
Alju02g0743 310 ProSiteProfiles B3 DNA-binding domain profile. 25 121 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0743 Alju-ChrAlju02 5486115 5488305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0743 228 308 C3H Transcription Factor Family AT2G27940 43.210 7.12e-17 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju02g0743 B3 1.1e-07 CL0405