Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0741 ATGCGGGAAAGAGCACCAGCTGTTAGAGGAGTGACCTTACAGAGAATTCCAAAGGAGTTCGTGAGAAGATTTGAGAATGAACTGTGTGTTAGTGAGGCTACGATTGGTGTTCCAGATGGTCGTGTGTGGAAGATGGAACTTAAGAAATCTGAAAACGAAGTTTATTTCTGCAAGGGTTGGGAGGAATTTGTGAAATATTACTCCCTTAGATTTGGCTTCTTTTTAGTGTTTAGATATGAAGGCAAGTCACAGTTCAGTGTGGTGATCTTTGATTCGAGTGCTGCTGAGATTTACTATCCGCGCAAACTTAACTCTGAGAAGCAGAACTCGGCACCTAAATGTCGTAGAAAAAGGCCACACAGCTTTGATCAATGTGGCCACAACACAAGGAGCCAAAAGCAGAAGCTAGTGGAAGATGAAGAAGAAATAATCCACATAGTGCTGCTCATAGAAGATGACGATACATTAAGCCATGGTAAATCAGGGAGCAGGGACAGATCTGGGCAAGGCCATAGTTTCAAAATGAAGAAGATAACTTTGAGTAAAAAGCAAAGAGCTATGGAGGCTGCCCAGAATTTCGAACAGACAGCAAATCGATCCTTTGCTGCAACAGTAAGGCCAAGTAATCTGAATCGTGGTTATATGGATGTGCCGAGTTCATTTTGGAAGGAGTATATGGGAAGAATGCGTCATATGAAGTTGCAGGATTACAAGGGACGAAAATGGGAGGTCAATTATTATGAACAATTGTCATCTATCCGAATAGGGAAGGGCTGGATCGGTTTTTCTAGGGCCAACAATGTAATGGAAGGAGACGCTTGTGTGTTTGAGCTTATCAAGAGGAACAACGGCTTTTAG 858 0.4254 MRERAPAVRGVTLQRIPKEFVRRFENELCVSEATIGVPDGRVWKMELKKSENEVYFCKGWEEFVKYYSLRFGFFLVFRYEGKSQFSVVIFDSSAAEIYYPRKLNSEKQNSAPKCRRKRPHSFDQCGHNTRSQKQKLVEDEEEIIHIVLLIEDDDTLSHGKSGSRDRSGQGHSFKMKKITLSKKQRAMEAAQNFEQTANRSFAATVRPSNLNRGYMDVPSSFWKEYMGRMRHMKLQDYKGRKWEVNYYEQLSSIRIGKGWIGFSRANNVMEGDACVFELIKRNNGF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0741 285 ProSiteProfiles B3 DNA-binding domain profile. 200 285 IPR003340 GO:0003677
Alju02g0741 285 Pfam B3 DNA binding domain 203 283 IPR003340 GO:0003677
Alju02g0741 285 Pfam B3 DNA binding domain 15 92 IPR003340 GO:0003677
Alju02g0741 285 Gene3D - 177 285 IPR015300 -
Alju02g0741 285 SUPERFAMILY DNA-binding pseudobarrel domain 196 281 IPR015300 -
Alju02g0741 285 SUPERFAMILY DNA-binding pseudobarrel domain 13 100 IPR015300 -
Alju02g0741 285 ProSiteProfiles B3 DNA-binding domain profile. 1 93 IPR003340 GO:0003677
Alju02g0741 285 CDD B3_DNA 199 285 IPR003340 GO:0003677
Alju02g0741 285 Gene3D - 9 94 IPR015300 -
Alju02g0741 285 PANTHER B3 DOMAIN-CONTAINING 15 281 - -
Alju02g0741 285 MobiDBLite consensus disorder prediction 108 124 - -
Alju02g0741 285 CDD B3_DNA 15 91 IPR003340 GO:0003677
Alju02g0741 285 MobiDBLite consensus disorder prediction 108 134 - -
Alju02g0741 285 SMART B3_2 8 93 IPR003340 GO:0003677
Alju02g0741 285 SMART B3_2 201 284 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0741 Alju-ChrAlju02 5467099 5468526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0741 15 99 B3 DNA Binding Superfamily AT3G18990 51.765 4.05e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju02g0741 B3 5.5e-15 CL0405