Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0736 ATGGGTCCTCTCATTCCTTCTCGTTTTTTCTGCCTTGTTTTCCTCGTGCTCTGTGCCTCCATACTCCACGTCCACGCCTCGGCTTGGCTTCATGCTCATGCAACCTTCTATGGGGCCGATCAAAGCCCCACCGCGTTGGGAGGAGCATGTGGCTATGATAATACGTTTCATGCTGGGTTTGGAGTGAACACAGCAGCAGTGAGCACGATTCTGTTCAGAGGTGGACAGGTGTGCGGTGCATGCTACCGAGTTGTATGCGACTACCGGACCGACCCTAAATGGTGCCTCCAGGGCCGCTCTGTCACCGTCACCGCCACCAACTTTTGCCCTCCCAACAACCACGGCGGGTGGTGCGACCCACCTCACCACCACTTCGACATGTCCATGCTTGCTTTCCTTCGCATTGCCCGACAAGGCAACGAAGGCATCGTCCCAGTCCTCTATACAAGGGTGAGATGCAGGAGAAGAGGGGGAGTGAGGTTCACGATGAAGGGGCAAGGGAACTTCAACATGGTGATGATTTCGAACGTAGGAGGGAGTGGGGAGGTGAAGAGCGTGTGGGTCCGGGCTTCCAGGTCAGCAGCATGGGCCCCAATGCATAGGAACTGGGGAGCCTACTGGCAAGCCAACATGGACCTTCGAAACCAAAACCTCTCCTTCAAGCTCAAATTGTCTGATTCCAACTCTCTTCTCTTCCTCAATGTTGTCCCTTCCTCTTGGTCCTTCGGCCAGACCTTTTCTTCCCGCTCTCAGTTCTTCTAA 762 0.5486 MGPLIPSRFFCLVFLVLCASILHVHASAWLHAHATFYGADQSPTALGGACGYDNTFHAGFGVNTAAVSTILFRGGQVCGACYRVVCDYRTDPKWCLQGRSVTVTATNFCPPNNHGGWCDPPHHHFDMSMLAFLRIARQGNEGIVPVLYTRVRCRRRGGVRFTMKGQGNFNMVMISNVGGSGEVKSVWVRASRSAAWAPMHRNWGAYWQANMDLRNQNLSFKLKLSDSNSLLFLNVVPSSWSFGQTFSSRSQFF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 141 157 IPR007118 GO:0005576
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Alju02g0736 253 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Alju02g0736 253 Gene3D - 16 154 IPR036908 -
Alju02g0736 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 158 IPR007112 -
Alju02g0736 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 248 IPR007117 -
Alju02g0736 253 SUPERFAMILY PHL pollen allergen 155 248 IPR036749 -
Alju02g0736 253 SUPERFAMILY Barwin-like endoglucanases 10 176 IPR036908 -
Alju02g0736 253 SMART dpbb_1 64 148 IPR007112 -
Alju02g0736 253 PANTHER EXPANSIN-A15 9 251 IPR002963 GO:0009664
Alju02g0736 253 Pfam Expansin C-terminal domain 159 237 IPR007117 -
Alju02g0736 253 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 169 190 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 157 169 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Alju02g0736 253 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Alju02g0736 253 Gene3D - 158 253 IPR036749 -
Alju02g0736 253 CDD DPBB_EXPA_N 29 148 - -
Alju02g0736 253 Pfam Lytic transglycolase 64 148 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0736 Alju-ChrAlju02 5442659 5443727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0736 12 253 Expansin Gene Family AT3G15370 58.394 5.62e-110 317