Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0719 ATGGAAAGAGAAGAAAGAGATTTCCTATTGTTCAGAAAATCTCGAGCCTTCCTTCCTTGTTCATCCTCGTCCTCACTTGTAGTTTTTCTCCTGCACCACAAAACCAACATGGGAGTGTCAGAGACAGACCTGCTAGCTCAATTGAGTCTACCTCCGGGTTTTCGGTTTTACCCGACCGACGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAGGTGGCCGGCCACCATTTCTCACTGCAAATCATTGGCGAAATTGACTTGTACAAATTCGATCCATGGGTTCTTCCAAGCAAAGCCATTTTCGGCGAGAAAGAATGGTACTTCTTCAGCCCGAGAGACCGAAAGTACCCAAACGGATCACGACCGAACAGGGTCGCCGGGTCTGGGTACTGGAAAGCCACCGGAACTGACAAAATCATCACCACCGCTGGTCGAAAGGTTGGCATAAAGAAAGCTCTCGTTTTCTATGTTGGGAAAGCACCGAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGTCTCCTAGATTCCTCTCGAAAGAGCGGAAGCACCAAGCTCGATGATTGGGTTCTGTGTCGGATATATAAGAAGAACTCGAGCTCCCAGAAGACTACGCCGATGATGGTTCCAAGCAAAGAATACGAATACAGCCACGGGTCGTCTTCGTCATCGTCGTCCCATCTGGACGACGTGCTGGAATCGTTGCCAGAAATCGACGACCGGTGTTTCGCGCTGCCACGTGTGAGCTCGCTGAAGACGTGGCAGCAGGAAGAGAAGCTGAATCTTCAGAATCTGAATGGTGGCAATAATTTCATGGAGTGGGCCAATCCGGCGATTCTGAACTCGGTGACGGAGTTCATTTCCGGGAATCAAACGCAGACCCAATCTCAATCTCAAGGGATGGTGAATTACAGTTCAATCAGCGACGTGCAGCATGTGCCGTCGATCCCGCCGCTGACAGTGCCGGAGGAGGAGGTCCAGAGCGGAGTGAGCAGTTCGGGGTTTTATCAGCAGACTTCAAACGCGTTCACGCAGGGGTTCGGTAACTCAATGAATGACCCGTATGGATTCAGATACCCCAATCAGACAATGGGGTTCGCATTTAGACAATGA 1116 0.5045 MEREERDFLLFRKSRAFLPCSSSSSLVVFLLHHKTNMGVSETDLLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKSGSTKLDDWVLCRIYKKNSSSQKTTPMMVPSKEYEYSHGSSSSSSSHLDDVLESLPEIDDRCFALPRVSSLKTWQQEEKLNLQNLNGGNNFMEWANPAILNSVTEFISGNQTQTQSQSQGMVNYSSISDVQHVPSIPPLTVPEEEVQSGVSSSGFYQQTSNAFTQGFGNSMNDPYGFRYPNQTMGFAFRQ 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0719 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 49 286 - -
Alju02g0719 371 SUPERFAMILY NAC domain 44 198 IPR036093 GO:0003677|GO:0006355
Alju02g0719 371 FunFam NAC domain-containing protein 72-like 59 203 - -
Alju02g0719 371 ProSiteProfiles NAC domain profile. 50 198 IPR003441 GO:0003677|GO:0006355
Alju02g0719 371 Gene3D NAC domain 59 204 IPR036093 GO:0003677|GO:0006355
Alju02g0719 371 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0719 Alju-ChrAlju02 5327698 5329029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0719 37 371 NAC Transcription Factor Family AT4G27410 59.040 5.41e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g0719 NAM 2.5e-36 No_clan