Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0703 ATGAACGAGAAGGCTAACGTGTCTAAGGAACTCAACGCCAAGCATAAAAAGATACTTGAAGGACTTCTTAAATTACCAGAAAATAGGGAGTGTGCTGACTGCAAAGCTAAAGGACCAAGATGGGCTAGTGTGAATCTAGGTATCTTTATATGCATGCAGTGCTCTGGAATACATCGAAGTCTAGGAGTACATATATCAAAGGTGCGTTCTGCAACTTTGGACACTTGGCTACCAGAGCAGGTTGCCTTCATTCAATCAATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAGTTACCCCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAATATGAAGAGAAGAGGTGGGTAGCAAAGGATGGGAAAACAACATCCCCTTCTAGACTGCAAGGACAACGAGACAAGGCTTCTTCACATTGGCAGAGGCCTGCAGAACAAAGTGGGCATGGTTCTCATGCATCTGCTGCTGAGAATACTTTTGAGGAAAGGAAGAAAATTCAACCATCAAATACAACTCCTGCTACTAAATTTAGTGTTTCCGCTCCCCCAAAAGGACCTCAGCTGGCAATACCTGTCATAAAACCTCAGCATGTTGAGAAAGTGGAAGCGGTGGCACCCCAACCTCAAGCTGAGACAACAAAACCAGCTAATGATATGCCTCAGAGTACCCCTGCAAAAGTTGACTATGCCACAGATCTGTTTGACATGTTGTCTATGAATGGCCCCAGTGAAAATGATTCTAATGCCGCCGCCGCCACAGCTGATGATAATAACTGGGCTGGTTTTCAGTCTGCTGCTACAGAGGTATCAACAGCAGAGAAGACTAGTCCCACAAAAGCAGTTGAGAGTACTCCGCCTGCTTCTGGAATTGAGGATCTATTTAAAGATTCAACTACGCCTTCTGTAACACCAAGCTTAATTCCAGAAAAACCACAGAAGGATTTAAAAAATGATATAATGAGCCTCTTTGAGAAGTCCAGTATGGTGTCTCCATTTGCAATGCATCAACAACAACTTGCCATGCTGGCACAGCAACAGTCCCTTCTAATGGCCGCTGCAGCTAAATCTGCGGGTGGGAACCCTAAGAATCTTGGTAGTTTACAACAATCTGGACTGAATGGGTCCAATATTGGTGCACAAAGCTGGCCAGGTGTCGGCTACCCTATCCCTGGCGCTGTGCCAATGCCTGGTCAGGCAGAGCTATTGAAACCCATGCAGACTGGGAACATGACTCCTGCACAGCCTGCAGGAAGTGCTGTTCAATATCCATCTGGTTTCTATATGATGGGACAAGTTGCTCCAGTTAATGGTACGCCCACAACCGGAGGGAGTAAGCCTCAGCCGGCAGCTCCAGCATCATCAACCTCTTCACAGTCTCCAGGAAAGGACTATGATTTTTCCTCTTTAACACAAGGGATGTTTTCAAAACACTGA 1452 0.4539 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVAKDGKTTSPSRLQGQRDKASSHWQRPAEQSGHGSHASAAENTFEERKKIQPSNTTPATKFSVSAPPKGPQLAIPVIKPQHVEKVEAVAPQPQAETTKPANDMPQSTPAKVDYATDLFDMLSMNGPSENDSNAAAATADDNNWAGFQSAATEVSTAEKTSPTKAVESTPPASGIEDLFKDSTTPSVTPSLIPEKPQKDLKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGNPKNLGSLQQSGLNGSNIGAQSWPGVGYPIPGAVPMPGQAELLKPMQTGNMTPAQPAGSAVQYPSGFYMMGQVAPVNGTPTTGGSKPQPAAPASSTSSQSPGKDYDFSSLTQGMFSKH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0703 483 CDD ArfGap 19 117 - -
Alju02g0703 483 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Alju02g0703 483 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Alju02g0703 483 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Alju02g0703 483 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Alju02g0703 483 MobiDBLite consensus disorder prediction 272 319 - -
Alju02g0703 483 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Alju02g0703 483 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Alju02g0703 483 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Alju02g0703 483 MobiDBLite consensus disorder prediction 124 194 - -
Alju02g0703 483 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 483 IPR044520 GO:0005096
Alju02g0703 483 MobiDBLite consensus disorder prediction 129 160 - -
Alju02g0703 483 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Alju02g0703 483 MobiDBLite consensus disorder prediction 440 483 - -
Alju02g0703 483 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Alju02g0703 483 MobiDBLite consensus disorder prediction 272 289 - -
Alju02g0703 483 MobiDBLite consensus disorder prediction 439 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0703 Alju-ChrAlju02 5198840 5203785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0703 16 131 C2H2 Transcription Factor Family AT4G05330 47.581 1.84e-30 119