Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0701 ATGATGTTGTCGACTTCGCCTTCAGCGATAGCGAGAAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCGAAGGACTTGCCGCCAGCTTTGCCAGCTCGTCCGACGTCGAGAGCTCGGCGTCCCTCAGCAAGACGGTCGCTGCCTGATAAATTTAGGATTGAAGGTAGTCAGAATGCAACAACAAGCTCCAAGAATAATTCTAATGCAAAGGCAAAAGAGACCAAGAAGAAAGAAGTGGATGTGGAACATAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGACATGGAATCGCCTTATATCGTGACCTCCGACGAGAATATGAGCCAACCATCATCAGAGGACCCTGTTTCAGCATCTACTGCTTCCATAGCAACATCGGGGAAGATTCAGGAGTTGGATGCTGATGACAATGTTGCTTATTACATAAAAGAGAAACTACGCGTTTGGTGTAGGCCGCCAAGTGGAAAGTGGGAGCTAGGACAGATACAATCAACTTCAGGAGAAGAAGCTTTCGTTTCGCTCTCACATGGAGATATTATGAAAGTGTCAAGATCAGAGCTTTTACCAGCTAATCCAGACATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTCTCAGGACATGATATATAATAAAGCAGGACCTGTTTTAATTGCCTTCAACCCCTTCAAAGAGATCCAGATATATGGAAATGATTATATCTCGGCTTATAGGCAGAAGACTACGGATATTCCTCACGTTTATGCTATAGCAGATGTGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATCATTATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAGTTTGCCATGCAATACTTAGCAGTTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACGAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGGTTGAGATTCATTTCAGCACGTTGGGGAGGATATGTGGTGCCAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCAGAGGCGAGAGGTCGTATCATATCTTTTATCAACTTTGTGCTGGTTCTTCTCCTGATCTTAAAGAGAGACTGAATCTTAAAGCTGCTAGTGAATATAAATATCTCAATCAGAGTGACTGCATGGCAATTGATGGTATTGATGATGCTAAAAATTTTCATAAGCTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCGAGAGCAAGTCTTCAAGATGATTGCTGCAATACTATGGCTGGGAAATATTTCATTCCAAGTAACTGACAATGAAAATCAAATTGAGGTTGTAAACGATGAAGCTGTTACCAATGCTGCCCTGCTAATGGGTTGCAGTTCCCAGGATTTGATGGTAACTTTATCTACTCGGAAAATCCAAGCTGGGAAAGATACTATTGCCAAAAAGTTGACATTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATGTATGCAAGATTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGCGGGTAAACGCTGCACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAACAGGAAGACTATGAATTGGATGGCGTTGATTGGACAAAAGTAGAATTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCTAGGGCTACTGATCTAACATTTGCCAACAAACTTAGACAGCACCTGAATGCTAATCCTTGTTTCATAGGGGAAAGAGGCAGAGCTTTTCTTGTTCGTCATTATGCGGGGGAGGTTTCCTATGACACAACTGGATTTCTAGAAAAGAACAGAGATCCTCTGCCTCCAGATTCCATTAAACTCCTGTCATCATGTAATTGTGAGCTGCCGCAGTTGTTCTCTAACCAGTCAAATTCCTCCCGCGTAGGTGCATTGGGTTCACAAAAGCAGAGTGTTGGGACAAACTTCAAGGGCCAATTATTCAAGCTGATGAATCAGTTGGAGGGCACCACACCTCACTTTATTCGCTGCATAAAGCCCAATACCAAGCACCTTACTGGAATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTCGAATGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGCAAGCGTATCTCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACAGGGCAGCTTGGCGTCCTGGAGGATAGGAGGAAACATGTTATACTGGGAATACTTGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTTTACGCCCTCAAGAATGGAGCAATAGCTTTACAATCACTTGTTCGCGGAGAGATTGCAAGAAAGACATATCATGAGATGAAGTCTGCTGCATCTATTGCTTCTGACAAGCTTCAGCAGACCCAGGCAATCACACGATTACAATCTGTGATCCGTGGGTGGCTGGTTCGAAGACGTGCTAGTAGTATCATTCATAAGTTGAAGAAAGCCAAACATAAGCAAAAGTCACGTTCTAAGATGTCAGAAATGAAGGATTTGTCCAAAGAGCAGGTTCAGAATCTGCCATCAACTTTGGCAGAACTCCGGAACCGGGTTGTCAAAGCTGAAGCAACTCTGAAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTCGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAAAAGAGTCTTTCAGTTGCTAGGAGGAGCCTTGCTGCTGAGAATTCCACGGATCAACCTGGAAGATACGATGCTGTGTCACCTTGCTTCTATGACTCAGAAGATGCCACTTCCATGGAATCCAGAACACCCACGGGCAGCACACCCATCAAATTTCCCAGCACTCCTTATGAGAATGGAGCAATGAGAGAGGCTAATGATACTTTCAATGCAGTGAGCAATCTGATGAAAGAGTTTGAGCAGCGGAAGCAGACTTTTGATGGTGATGCTAGAGCTCTACTTGCGGTTAGATCAGGGCAGCCTGCTCACATGAATCCCAACGAAGAACTCCGGCAGCTTAAACACCGATTTGAAGGATGGAAGAAAGAATACAAGGGACGATTACGGGAAACAAAAGCAAGGCTTTCTAAGAGGGGGAGTCCAGAAGCCGAAATTACTTGTCAAAGATGGTGGGGCAAGATAGGCTCAAGAGGACTATAG 3615 0.4304 MMLSTSPSAIARSSLEEMLESIRRRGEEEKPKDLPPALPARPTSRARRPSARRSLPDKFRIEGSQNATTSSKNNSNAKAKETKKKEVDVEHKRKGSFASKKMKQDMESPYIVTSDENMSQPSSEDPVSASTASIATSGKIQELDADDNVAYYIKEKLRVWCRPPSGKWELGQIQSTSGEEAFVSLSHGDIMKVSRSELLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYNKAGPVLIAFNPFKEIQIYGNDYISAYRQKTTDIPHVYAIADVAFNEMMRDEVNQSIIISGESGSGKTETAKFAMQYLAVLSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLVEIHFSTLGRICGAKIQTFLLEKSRVVQLARGERSYHIFYQLCAGSSPDLKERLNLKAASEYKYLNQSDCMAIDGIDDAKNFHKLMKALDDVRICKEDREQVFKMIAAILWLGNISFQVTDNENQIEVVNDEAVTNAALLMGCSSQDLMVTLSTRKIQAGKDTIAKKLTLWQATDTRDGLAKFMYARLFDWLVEQINKSLEAGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVEFEDNQECLDLFEKKPLGLISLLDEESNFPRATDLTFANKLRQHLNANPCFIGERGRAFLVRHYAGEVSYDTTGFLEKNRDPLPPDSIKLLSSCNCELPQLFSNQSNSSRVGALGSQKQSVGTNFKGQLFKLMNQLEGTTPHFIRCIKPNTKHLTGIYDEDLVLQQLRCCGVLEVVRISRAGYPTRMMHQEFARRYGFLLSEASVSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQLGVLEDRRKHVILGILGVQKWLRGHQARRNFYALKNGAIALQSLVRGEIARKTYHEMKSAASIASDKLQQTQAITRLQSVIRGWLVRRRASSIIHKLKKAKHKQKSRSKMSEMKDLSKEQVQNLPSTLAELRNRVVKAEATLKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQKSLSVARRSLAAENSTDQPGRYDAVSPCFYDSEDATSMESRTPTGSTPIKFPSTPYENGAMREANDTFNAVSNLMKEFEQRKQTFDGDARALLAVRSGQPAHMNPNEELRQLKHRFEGWKKEYKGRLRETKARLSKRGSPEAEITCQRWWGKIGSRGL 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0701 1204 ProSiteProfiles IQ motif profile. 875 901 IPR000048 GO:0005515
Alju02g0701 1204 SMART iq_5 930 952 IPR000048 GO:0005515
Alju02g0701 1204 SMART iq_5 871 893 IPR000048 GO:0005515
Alju02g0701 1204 SMART iq_5 894 916 IPR000048 GO:0005515
Alju02g0701 1204 ProSiteProfiles IQ motif profile. 931 960 IPR000048 GO:0005515
Alju02g0701 1204 Coils Coil 1107 1127 - -
Alju02g0701 1204 PRINTS Myosin heavy chain signature 566 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 PRINTS Myosin heavy chain signature 237 256 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 PRINTS Myosin heavy chain signature 619 647 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 PRINTS Myosin heavy chain signature 291 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 PRINTS Myosin heavy chain signature 334 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 Gene3D - 804 871 - -
Alju02g0701 1204 ProSiteProfiles IQ motif profile. 895 923 IPR000048 GO:0005515
Alju02g0701 1204 Gene3D Kinesin motor domain 206 803 IPR036961 -
Alju02g0701 1204 PANTHER MYOSIN 200 1185 - -
Alju02g0701 1204 CDD MYSc_Myo8 221 858 IPR036022 -
Alju02g0701 1204 MobiDBLite consensus disorder prediction 17 35 - -
Alju02g0701 1204 MobiDBLite consensus disorder prediction 61 76 - -
Alju02g0701 1204 Gene3D - 578 760 - -
Alju02g0701 1204 Gene3D - 390 446 - -
Alju02g0701 1204 MobiDBLite consensus disorder prediction 1 107 - -
Alju02g0701 1204 FunFam Myosin heavy chain 390 446 - -
Alju02g0701 1204 SMART MYSc_2a 201 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 MobiDBLite consensus disorder prediction 77 101 - -
Alju02g0701 1204 ProSiteProfiles Myosin motor domain profile. 207 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 MobiDBLite consensus disorder prediction 114 133 - -
Alju02g0701 1204 Coils Coil 989 1023 - -
Alju02g0701 1204 Pfam Myosin head (motor domain) 209 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 FunFam Myosin IE heavy chain 447 555 - -
Alju02g0701 1204 MobiDBLite consensus disorder prediction 1080 1104 - -
Alju02g0701 1204 Gene3D Myosin VI head, motor domain, U50 subdomain 447 555 - -
Alju02g0701 1204 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 154 203 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju02g0701 1204 MobiDBLite consensus disorder prediction 1080 1099 - -
Alju02g0701 1204 Pfam IQ calmodulin-binding motif 932 950 IPR000048 GO:0005515
Alju02g0701 1204 Pfam IQ calmodulin-binding motif 878 892 IPR000048 GO:0005515
Alju02g0701 1204 Pfam IQ calmodulin-binding motif 898 916 IPR000048 GO:0005515
Alju02g0701 1204 FunFam Unconventional myosin-XIX 578 760 - -
Alju02g0701 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 923 IPR027417 -
Alju02g0701 1204 Gene3D - 876 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0701 Alju-ChrAlju02 5178858 5187412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0701 1 1200 Myosins gene family AT5G54280 61.681 0.0 1538