Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0693 ATGACGAAGGCTTCTTCTAGTGATCATCAAAAGAACGGGTTGAAGAAAGGTCCGTGGACTCCTGAAGAGGATCAGAAGCTCATCGATTATATTCATAAACATGGACACGGCAAATGGCGAACTCTTCCCAAGAATGCTGGACTCAAGAGATGTGGAAAGAGTTGCCGGCTACGCTGGACAAATTACTTAAGGCCAGATATAAAGAGAGGCAGATTCTCTTTCGAGGAAGAAGAAACCATCATCCAGTTACATAGTGTTTTGGGAAACAAGTGGTCCACCATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAGAATTATTGGAATACTCATATCAAGAAGAGGCTGTTGAAGATGGGGATTGATCCAGTGACTCACACTCCATGCTTGGATATTCAACAACTATCCTCCATTCTCAACTCTTCTCTCTACAACTCACCTCATGTTAACCATCCTCCTCAATTCGGAATGGGAAATAACATATTAAATCCAAGCCTCTTAAGCTTGCTCTCAGCTTTCTTATCATCCTCATCTCAGAACCCAGATGCTCCAAATCAAAATTACCACCAGTTGAATAACTCTATCCCAAACTTCCCTCTTCAAGAAAACCAATCCTGTGCTGCTGCATCACAGCCTTTACCTCTGGAATCTCAACAGATGATATCTCCAGATACCACTAATTTTAGTTTCCAAAGTAGCCTGCCAAATGTGGGGCACTACGAAGGAGGTCATAATTACTCTACTAGTCTTTTGGAGAATCATCAGATTGCACAAAACAACAGAGGAGATCCGAATTTCACTACTTTAGGGTCATTGATATCGTACTCGACACCTTCATCTTCTACTAGTCCGAGCACTTTGAATTCGTCCGCATCTTCCACAACTTTCGTCAAGGGCGCCACTGAAGAGGAAAGGGACACGTACTGCAGCAACATGTTGATGTATAACATCTCAAACGCCTTGAATAATATGGATGGCTCTAATTGTCTATTGTGA 1002 0.4251 MTKASSSDHQKNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNSSLYNSPHVNHPPQFGMGNNILNPSLLSLLSAFLSSSSQNPDAPNQNYHQLNNSIPNFPLQENQSCAAASQPLPLESQQMISPDTTNFSFQSSLPNVGHYEGGHNYSTSLLENHQIAQNNRGDPNFTTLGSLISYSTPSSSTSPSTLNSSASSTTFVKGATEEERDTYCSNMLMYNISNALNNMDGSNCLL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0693 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 275 - -
Alju02g0693 333 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Alju02g0693 333 Gene3D - 71 118 - -
Alju02g0693 333 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Alju02g0693 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Alju02g0693 333 Gene3D - 13 69 - -
Alju02g0693 333 SMART sant 68 116 IPR001005 -
Alju02g0693 333 SMART sant 15 65 IPR001005 -
Alju02g0693 333 FunFam Transcription factor MYB39 71 132 - -
Alju02g0693 333 MobiDBLite consensus disorder prediction 1 21 - -
Alju02g0693 333 CDD SANT 71 114 IPR001005 -
Alju02g0693 333 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Alju02g0693 333 CDD SANT 18 63 IPR001005 -
Alju02g0693 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Alju02g0693 333 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Alju02g0693 333 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Alju02g0693 333 FunFam MYB-related transcription factor 15 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0693 Alju-ChrAlju02 5114287 5115667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0693 10 324 MYB Transcription Factor Family AT4G21440 46.857 7.34e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g0693 Myb_DNA-binding 6.1e-17 CL0123