LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0684	ATGAAATTATTTTTTGAGCTGGGTGAAGATGAAGTCTTCTATGAATATGCTGTTCTAAATAATTCAATATTAATGAGAAGCAGACTGACGCCAGAAGGCTATCCAATACGTTTTACATGGTCTCCTCAGGCAAATAGATGGGATATGAACTACCCTAGCCAGTTTGATCAGTGTGAAAGATATGCCTTGTGTGGTCTAAATACTAATTGCAACAGTACTGACTCTCAGAGTTGTAAATGCTTGACCGGGTACGCAACAATCACGTCCGTGGCTTCAGACCCAGTGGATAATAGCTTGGACAAGAAGAAGCTTGCAGGAATTGTGATCGGTTGTACTATATTTGTCATGACCATAGTAGTACTTGGATTGACTATTTGGATTAAGAAGAACAAATTCATGCGTCCAGGCAAAGCATTTTCCAATATTTGGAAGGACAAGGGTGACCAGGATAACATTGATTTACCAATATTTGAATTTTCAAGCATTTTTAATGCCACAAATCAATTTTCTGTGAGTAACAAATTAGGACAAGGTGGCTTCGGACCAGTCTACAAGGGAATACTAGCTGATGGACAAGAGATTGCAGTAAAGAGGCTTTCCAAAACATCAGTACAAGGAATAGATGAGTTTAAAAATGAAGTCTTGTTGATTGCAAAACTTCAACATCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATAGAACAAGAAGAAAAGCTGTTGATATATGAATTCATGCCCAATGGAAGCTTGGATTACTTTATTTTTAATTCAACACAAACTAAGCTATTGAATTGGACTAAGCGATTCCATATTATTGATGGTATTGCTCGAGGCCTTCTTTATCTTCATCAAGATTCAAGATTGCGAATCATCCATCGAGATCTCAAAACCAGCAACATTCTTCTAGATAATGATATGAATCCAAAAATATCAGACTTTGGCATAGCTAGAATTTTTGGAAGAGATCAAGCTGAGGAAAATACAAACAGAGTGATGGGAACATATGGTTATATGCCTCCAGAATATGCAATGCATGGATCTTTTTCAGCCAAATCTGATATTTTTAGCTTTGGAGTAATTGTATTGGAGATAATCAGCGGAAAGAAGAACAGGGGATTTTGTGATCCACATCATCGTCTTAACCTTCTAGGACATGCATGGAAACTATGGATTGAGGAAAGGCCAATAGAGCTAATGGATGAACAACTAAAAAATTATGCTATCACATCTGAATTGTTAAGATGTATTCAGGTGGGTCTGTTATGCGTTCAGCAAAGGCCAGAGGATAGGCCTAACATGTCAACTGTGGTTTTGATGTTGAATGGTGAAAAGTTACTGCCTGACCCAAGCCAACCTGGGTTCTACACCGAAAGGGATAATCCAGTCCCAGCAGATTCTGCTACAAGAAGTACCGGAGAGTGTTCAATCAATGAAGTTTCCCACTCATTTTTAGAGGCAAGGTAG	1464	0.3825	MKLFFELGEDEVFYEYAVLNNSILMRSRLTPEGYPIRFTWSPQANRWDMNYPSQFDQCERYALCGLNTNCNSTDSQSCKCLTGYATITSVASDPVDNSLDKKKLAGIVIGCTIFVMTIVVLGLTIWIKKNKFMRPGKAFSNIWKDKGDQDNIDLPIFEFSSIFNATNQFSVSNKLGQGGFGPVYKGILADGQEIAVKRLSKTSVQGIDEFKNEVLLIAKLQHRNLVKLLGCSIEQEEKLLIYEFMPNGSLDYFIFNSTQTKLLNWTKRFHIIDGIARGLLYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGIARIFGRDQAEENTNRVMGTYGYMPPEYAMHGSFSAKSDIFSFGVIVLEIISGKKNRGFCDPHHRLNLLGHAWKLWIEERPIELMDEQLKNYAITSELLRCIQVGLLCVQQRPEDRPNMSTVVLMLNGEKLLPDPSQPGFYTERDNPVPADSATRSTGECSINEVSHSFLEAR	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0684	487	SMART	serkin_6	169	438	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0684	487	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	290	302	IPR008271	GO:0004672\|GO:0006468
	Alju02g0684	487	MobiDBLite	consensus disorder prediction	451	472	-	-
	Alju02g0684	487	Pfam	S-locus glycoprotein domain	6	85	IPR000858	GO:0048544
	Alju02g0684	487	Gene3D	Transferase(Phosphotransferase) domain 1	245	446	-	-
	Alju02g0684	487	SUPERFAMILY	Protein kinase-like (PK-like)	153	440	IPR011009	-
	Alju02g0684	487	ProSiteProfiles	Protein kinase domain profile.	169	446	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0684	487	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	67	463	-	-
	Alju02g0684	487	Gene3D	Phosphorylase Kinase; domain 1	143	244	-	-
	Alju02g0684	487	CDD	STKc_IRAK	175	442	-	-
	Alju02g0684	487	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	245	448	-	-
	Alju02g0684	487	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	137	244	-	-
	Alju02g0684	487	Pfam	Protein tyrosine and serine/threonine kinase	171	438	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0684	Alju-ChrAlju02	5019629	5022065	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0684	93	455	Receptor kinase-like Gene Family	AT4G23190	52.419	2.19e-131	391

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju02g0684		PK_Tyr_Ser-Thr	6.5e-47	CL0016