LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0682	ATGAAAACTTCTGAGATAGCTGTGAAAGGAGGACATAAGATGAAGGTGGCTGCGATTATCATCATTGTTGCCTCAGTTGTTGTGATAATTTTGATTTTCCTCTACATTGGCAAGACCTTGAAATTGTTTACAGAGGAAACAGAGGACAACCTGATGACACAGTATAATGATGAAGACGAACAAGAAGATTTGGAGCTTCCTTTCCTTGACCTCCCCACAATTGTCAAAGCAACTGATGACTTCTCAATCAGCAAGAAACTTGGACAAGGTGGATTCGGGGCTGTATACAGGGGTATGCTTGTGGATGGAATAGAAATTGCAGTGAAGAGGCTTTCTCAAAGTTCTGGACAAGGGTTGAATGAATTCAAGAACGAAGTCATATTGATTTCCAAGCTACAACATCGAAATCTTGTTAAACTTCTTGGTTGTTGCATCCAAGGAGAGGAGAAAATGCTTGTCTACGAGTACATGCCCAACAAAAGCTTGGACTCTTTCATCTTTGATCATGTAAAATGTAAGATTCTAGATTGGCCTAAGCGCTTCAACATTGTTTGTGGAATTGCTCGAGGGCTTTTGTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTTAAAGCAAGTAATATTTTGCTTGACAGCGAGTTGAATCCAAAAATTTCAGATTTTGGCATGGCTAAAACTTTTGGAGGAGATCAGACTGAAGGGAATACTAATAGGGTAGTTGGAACATATGGTTATATGGCACCTGAATATGCTATCCATGGGCTATTCTCAGTAAAATCAGATGTCTTTAGTTTTGGCGTTTTGTTACTGGAGATAGTAAGTGGAAAAAAGAACAGAGAATTTTCCCATTCAAACATGTGTCATAACCTTATTGGGCATGCATGGAGACTTTGGAAAGAAGGCAGACCTTTAGAGTTAATAGATCCATGCCTGGATGATCTATTTGATCTATCTGAAGCAATGCGTTGCATCCATATCAGCCTTCTATGTCTGCAACAACATCCTGAAGATAGACCAAGTATGTCTAAGGTGGTTGTTATGTTAAGCAGTGAGGGTGTCTTACCCGATCCTTCAGAACCTGCTTACATCATAGAGAAGAAATTTCCAGAAACAGACTCTTCTTGCAAGCATCAGTTTTCTTCAACTAATGAAATGACTGTTACTATGTTGGAGCCTCGATAG	1194	0.3928	MKTSEIAVKGGHKMKVAAIIIIVASVVVIILIFLYIGKTLKLFTEETEDNLMTQYNDEDEQEDLELPFLDLPTIVKATDDFSISKKLGQGGFGAVYRGMLVDGIEIAVKRLSQSSGQGLNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYMPNKSLDSFIFDHVKCKILDWPKRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNILLDSELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNREFSHSNMCHNLIGHAWRLWKEGRPLELIDPCLDDLFDLSEAMRCIHISLLCLQQHPEDRPSMSKVVVMLSSEGVLPDPSEPAYIIEKKFPETDSSCKHQFSSTNEMTVTMLEPR	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0682	397	Gene3D	Transferase(Phosphotransferase) domain 1	157	357	-	-
	Alju02g0682	397	ProSiteProfiles	Protein kinase domain profile.	81	358	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju02g0682	397	Pfam	Protein tyrosine and serine/threonine kinase	82	351	IPR001245	GO:0004672\|GO:0006468
	Alju02g0682	397	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	202	214	IPR008271	GO:0004672\|GO:0006468
	Alju02g0682	397	Gene3D	Phosphorylase Kinase; domain 1	43	156	-	-
	Alju02g0682	397	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	45	156	-	-
	Alju02g0682	397	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	18	378	-	-
	Alju02g0682	397	CDD	STKc_IRAK	87	352	-	-
	Alju02g0682	397	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	157	360	-	-
	Alju02g0682	397	ProSitePatterns	Protein kinases ATP-binding region signature.	87	109	IPR017441	GO:0005524
	Alju02g0682	397	SUPERFAMILY	Protein kinase-like (PK-like)	65	384	IPR011009	-
	Alju02g0682	397	Pfam	Domain of unknown function (DUF3403)	353	397	IPR021820	GO:0004674
	Alju02g0682	397	SMART	serkin_6	81	352	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0682	Alju-ChrAlju02	5011750	5014114	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0682	21	369	Receptor kinase-like Gene Family	AT4G23230	55.524	1.05e-138	408

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Alju02g0682		PK_Tyr_Ser-Thr	1.4e-50	CL0016