Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0678 ATGGCGGAAGATCAATTTCAAGCCCCTGGAAACTGGTGGGACTCAGCCTCCAGAAACTCCACCAGGTTCGAAACTGAGGCTTCTCAATCCTCCAACTTCGCTTGGCAACACACAGACATGTCGTCTCATCATGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCCCAACCTCCACATGATGGCTCTAGGCCTCTCTTCCCAACCTCTCGACTGGAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGTGGGGAGAGCAGTTTCTTGAACGCATCAAGCACAAATTTTCAGCAAGAAAGTGCGATGATGGGGTTGTCTCCTCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCTGAGTCCTCTTCTTCAACCAACGAGTTCAAACGAGGTTTCTCTTTGGATCAAACTCAGTATAGTTCTGGGGAAAGTACTGTTACAACCCAAGGCTTAGCCTCTAGTCCTAACTTTCAGATGGATTTGTATGGAAACTCGTCCATGTTACAAGGACTATTAGGACCCGATAATAATAATAACAGTCAAGTCCAGTATGATCATCATCATCAGAATCGCCAGATTAACTTTCCATATCAGGCATCAAGCTACGGATTGAATAGTAACGATCAGTTAATGCCTCCATGGTCTAAAGTTCCTCAATTTCTGAGAGCTTCACCTCCTAAACAACAACAACCACCCCATAATAACAATAGTCAGTTGCATTTCACAAACAACGCTCCCTTCTGGAACGCTTCTGAGGCCTCCAATATTAAAGATGTTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAGGTTAGGGATTCAAGTAGCGTGGTGAAGAAAAGTGGGAGCGAGGCAGCACCCAAAAGGCCTCGGAGCGAAACTCCATCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGCGCACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCAGGTAAATCTAAAGAAGGAGAGGGGGGAAAGCAAGATCTGAGAAACAGAGGGCTATGTCTGGTGCCAGTGTCGAGTACATTTCCAGTGACTCAAGAAACCACAGTTGATTTTTGGACGCCAACATTTGGAGGAACATTCAGATAA 1308 0.4602 MAEDQFQAPGNWWDSASRNSTRFETEASQSSNFAWQHTDMSSHHDLKPRSSMAASPSSSDPNPNLHMMALGLSSQPLDWNQPSFLRGAEKGGGESSFLNASSTNFQQESAMMGLSPQVQWRDKLFSAESSSSTNEFKRGFSLDQTQYSSGESTVTTQGLASSPNFQMDLYGNSSMLQGLLGPDNNNNSQVQYDHHHQNRQINFPYQASSYGLNSNDQLMPPWSKVPQFLRASPPKQQQPPHNNNSQLHFTNNAPFWNASEASNIKDVRSGFFPSLQPPFPSPSFDVQSKNMCEVRDSSSVVKKSGSEAAPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSAPYMKSGAPIQHQQSPGKSKEGEGGKQDLRNRGLCLVPVSSTFPVTQETTVDFWTPTFGGTFR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0678 435 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 364 IPR011598 GO:0046983
Alju02g0678 435 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 106 416 - -
Alju02g0678 435 MobiDBLite consensus disorder prediction 1 68 - -
Alju02g0678 435 Gene3D - 325 386 IPR036638 GO:0046983
Alju02g0678 435 MobiDBLite consensus disorder prediction 10 39 - -
Alju02g0678 435 MobiDBLite consensus disorder prediction 230 250 - -
Alju02g0678 435 SMART finulus 326 370 IPR011598 GO:0046983
Alju02g0678 435 CDD bHLH_AtbHLH_like 321 372 IPR045239 -
Alju02g0678 435 MobiDBLite consensus disorder prediction 379 401 - -
Alju02g0678 435 FunFam Transcription factor bHLH123 family 325 387 - -
Alju02g0678 435 MobiDBLite consensus disorder prediction 295 325 - -
Alju02g0678 435 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 382 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0678 Alju-ChrAlju02 4991420 4993407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0678 247 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 66.667 7.27e-76 240
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0678 02 4991420 4993407 Alju02g0678 02 4991420 4993407 ECH