Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0657 ATGGACTCGCAGCAGCTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCTTACTCGCCATCTTATTCCACTATCCCATCCTTACCTACAAGGTTTCTCGGATCCTTGAAATTTGACACAGGAAACTCACCCAATTCACCCTTTTCTACTCAATTTGATTCGGATTCTCTCTCTACATTGAGCGACGAGAAGCACGGTTCTGGGGAGATTCTTTCTGGTTTCAGCCCTTCTTATGACTCTTCTCTGGAAACTAATTATTACTTAAACAGGTCAATCTCACCTGTGGACCGTCTCCAGGACAGTCTGCATCCATATTTGGCTAGGAGGTCTCTTCCACAGGATGCAAGTTCTAGCCAAAAGATCAGGCACGCTTTGCTGGAGTTAGAGTCTGCTCTGATGGCCCCAGATGACGGTGATGTAGCTACCACATCAAATACTTCTTTGAGTGGGATCAACAAGCCTACAACTTCTGGCCAAAGATATGGGCCTTGGAACCAGGAGCGCCAAGGGTCACAATACGTCCAAAGCCAGCCATCTTTTGCCACTAGCACTAGGCAGTCAAATGAAGTTGCACATGTTGAGAAGCGTCACAAACTAATGGAGGAAGCTTGGCTCCAGGGCTTCCCACCTAGCAATTTAAAAGAATTGTTGATTGCTTGCGCCAAAGCCCTCTCTGAAAGCAACATGAAAGTCTTTGACGAGTTGATTGAAAAGGCTAAAAGTGCTGTGTCTATCTGTGGCGAGCCAATCCAGCGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGAAGGAGGCATCAGGTAATAGCATATATCATGCCCTCAGGTGCCGGGAACCTGAAGGCAAAGACCTGCTCTCGTACATGCACATGCTGTATGAGATTTTCCCCTACTTTAAATTTGGTTACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGAACTGAAGACCGCATTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGCAGACGCTCCTTCAAGCTCTTGCAGTAAGGCCTGGTGGGGCACCCCATGTCCGGATCACCGGAATTGATGATCCCATCTCTCGATATGCACGTGGTGACGGCCTAGATGAAGTTGGGAAAAAATTGACCGCAATCTCGGACAAATTTGGTATCCCAGTTGAGTTTCATGGAGTGCCTATGTTTGCTCCAGAAGTTACAAGGGACATGCTTGATGTAAGGCCTGGAGAGGCTTTGGCTGTGAACTTTCCCCTGCATCTGCATCACACAGCTGATGAGAGTGTTGATGTGAACAACCCGAGGGATGAACTTCTGAGAATGGTGAAGTCACTTGGTCCCAAGGTGACCACGTTAGTGGAACAGGAATCCAACACAAACACAACGCCATTCTACAACAGGTTCTTAGAAACATTGGACTACTACTTGGCCATGTTCGAGTCCATTGATGTCACACTACCAAGAAATAGCAAGGAGCGGATTAATGTGGAGCAGCACTGCTTGGCGAGGGACATCGTGAACGTCATTGCTTGTGAAGGGAAGGCAAGGATAGAGCGACACGAGCTGTTGGGAAAGTGGAAGTCAAGGTTGACAATGGCCGGATTCCGACAGTATCCATTGAGCTCTTACGTGAATTCTGTGATCAGAAGCCTACTTAGGTACTATTCAGAGCATTATACGCTGGTGGAGAAGGATGGGGCTATGTTGTTGGGGTGGAAACACAGAAATCTGATATCAGCCTCAGCCTGGCATTGA 1752 0.4772 MDSQQLFSFSVTGSGIPYSPSYSTIPSLPTRFLGSLKFDTGNSPNSPFSTQFDSDSLSTLSDEKHGSGEILSGFSPSYDSSLETNYYLNRSISPVDRLQDSLHPYLARRSLPQDASSSQKIRHALLELESALMAPDDGDVATTSNTSLSGINKPTTSGQRYGPWNQERQGSQYVQSQPSFATSTRQSNEVAHVEKRHKLMEEAWLQGFPPSNLKELLIACAKALSESNMKVFDELIEKAKSAVSICGEPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEIFPYFKFGYMAANGAIAEACRTEDRIHIIDFQIAQGVQWQTLLQALAVRPGGAPHVRITGIDDPISRYARGDGLDEVGKKLTAISDKFGIPVEFHGVPMFAPEVTRDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVTTLVEQESNTNTTPFYNRFLETLDYYLAMFESIDVTLPRNSKERINVEQHCLARDIVNVIACEGKARIERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRYYSEHYTLVEKDGAMLLGWKHRNLISASAWH 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0657 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 179 579 IPR005202 -
Alju02g0657 583 Pfam GRAS domain family 213 582 IPR005202 -
Alju02g0657 583 MobiDBLite consensus disorder prediction 140 171 - -
Alju02g0657 583 MobiDBLite consensus disorder prediction 44 64 - -
Alju02g0657 583 ProSiteProfiles GRAS family profile. 204 583 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0657 Alju-ChrAlju02 4790253 4792004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0657 121 582 GRAS Transcription Factor Family AT5G48150 53.780 2.18e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g0657 GRAS 6.4e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0657 02 4790253 4792004 Alju10g0872 10 7949252 7951012 CCT
Alju02g0657 02 4790253 4792004 Alju02g0657 02 4790253 4792004 ECH