Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0645 ATGGTTGGCCCGGAAAACACCAATTGGCTTTTCGATTATGGTTTAATTGACGATATAACTGTCCCGGATGAGAGCTTTACTATACCTGCTTCCGGGTTCAGCTGGCCGGCGCAGGCCTTGAATGGTTCTTCCAATATCAGTGCTGAAATTGATGGCACGTTGGGGGATGCTGATGGTGTAAAAGAGTCTGGTTCAAAGAAGAGGGGTAGGCCTGAATCATGTTCTGCTTCTAGTTCAAAGGCATGTCGGGAAAAGCTGAGGAGGGACAGGCTGAATGACAAGTTTCTTGAATTAGGCTCTATTTTGGAGCCTGGAAGGCCCTCCAAAACAGACAAGGCTGCTATTCTGGTTGATGCTGTTCGAATGGTGACACAATTACGGGGTGAAGCCGAGAAGTTGAAGGACTCAAACATGAATCTTCAAGAGAAGATTAAAGAGCTAAAGGCAGAGAAGAACGAACTACGAGATGAGAAACAGAGGCTCAAGGCTGAGAAAGACAAGCTGGAGCAGCAGCTGAAAGCTATCAATGCCCAACCTAATTTCATGCCTCCGCCTGCTGCAATCCCTGCTGCATTTGCTGCTCAAGGCCAAGCCCCTGGCAGCAAGTTGGTCCCTTTTATTGGTTATCCTCCCGGTGTTGCCATGTGGCAATTTATGCCTCCAGCTGCTGTGGATACTTCACAGGACCATGTGCTCCGTCCACCAGTTGCTTAA 714 0.4846 MVGPENTNWLFDYGLIDDITVPDESFTIPASGFSWPAQALNGSSNISAEIDGTLGDADGVKESGSKKRGRPESCSASSSKACREKLRRDRLNDKFLELGSILEPGRPSKTDKAAILVDAVRMVTQLRGEAEKLKDSNMNLQEKIKELKAEKNELRDEKQRLKAEKDKLEQQLKAINAQPNFMPPPAAIPAAFAAQGQAPGSKLVPFIGYPPGVAMWQFMPPAAVDTSQDHVLRPPVA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0645 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Alju02g0645 237 SMART finulus 81 132 IPR011598 GO:0046983
Alju02g0645 237 Gene3D arf6 gtpase in complex with a specific effector, jip4 125 179 - -
Alju02g0645 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 145 IPR036638 GO:0046983
Alju02g0645 237 MobiDBLite consensus disorder prediction 51 85 - -
Alju02g0645 237 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Alju02g0645 237 Gene3D - 65 124 IPR036638 GO:0046983
Alju02g0645 237 Coils Coil 123 178 - -
Alju02g0645 237 CDD bHLH_AtILR3_like 83 155 - -
Alju02g0645 237 PANTHER BHLH TRANSCRIPTION FACTOR 5 237 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Alju02g0645 237 FunFam Transcription factor bHLH34 66 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0645 Alju-ChrAlju02 4716618 4718821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0645 1 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 73.750 2.41e-116 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g0645 HLH 1.7e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0645 02 4716618 4718821 Alju02g0645 02 4716618 4718821 ECH