Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0624 ATGAAGATCTATGACGACTCTCTTCATAAGGCTAAGAAGATCAAACGACATATCTTCAAATTTGGATCGAACACCACAGGTTCTTCATCAAAAATAGACATCAACAACAAAGGAAAAGATCATGATCGTCATTATCATGATGATGATGATCAGATAACACAAAAAACTTTCAGATGCAATTTTTGCAAGAGAGAGTTTTCTTCCTCACAGGCCTTAGGAGGCCATCAAAATGGGCACAAACAAGAGCGTGCAATGGCAAAACAACGACAAGCTGGGATTATTTTTCATAATCATTTTGGTTTTCTAGGTCGTAACTATTCTTCACACGTTCCTTATTATGGTAATTACCCTTATTATGCTAATCCCCAGATTAATTATGGGCCTTTAGGCTATAATAATAGGCCATTTGGGGTTAAATTGGAGTCCGTGATTCATAAGCCTTCTTATAACCCTAGTTTTAGATTCAGGCATGATCTTCAAACCCTAGATAGGCTTATGGCAAGTTCATCAGGAGCTTCAAGGATTGAAGAAACTGGTAACAACAGTCCTATAACTTATCAATTCGACCAAATTTCTCCTTCTTCAGCTACCACTGATGATACTGCAATTGGTGATCAACGTTTCAAGTTTACATCAGTAGAAGCTTCAAAAGAGGATGATAATCTTGATTCTTCAGGTCTTGACTTGACTCTTCGGCTTTAA 702 0.3732 MKIYDDSLHKAKKIKRHIFKFGSNTTGSSSKIDINNKGKDHDRHYHDDDDQITQKTFRCNFCKREFSSSQALGGHQNGHKQERAMAKQRQAGIIFHNHFGFLGRNYSSHVPYYGNYPYYANPQINYGPLGYNNRPFGVKLESVIHKPSYNPSFRFRHDLQTLDRLMASSSGASRIEETGNNSPITYQFDQISPSSATTDDTAIGDQRFKFTSVEASKEDDNLDSSGLDLTLRL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0624 233 Gene3D Classic Zinc Finger 34 98 - -
Alju02g0624 233 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 36 233 IPR044246 GO:0009788
Alju02g0624 233 MobiDBLite consensus disorder prediction 170 200 - -
Alju02g0624 233 Pfam C2H2-type zinc finger 57 81 - -
Alju02g0624 233 SUPERFAMILY beta-beta-alpha zinc fingers 54 85 IPR036236 -
Alju02g0624 233 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Alju02g0624 233 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0624 Alju-ChrAlju02 4551650 4552351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0624 54 150 C2H2 Transcription Factor Family AT5G10970 43.564 1.26e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju02g0624 zf-C2H2_6 1.7e-05 CL0361