Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0623 ATGAATTACCCTATATTCCCAGGCTGCTCATCTTCTCGGAGGACCTGGAAATACGAAGTATTTCTGAGTTTCAGAGGTGAGGATACTCGCAACAGTTTCGCTGGTCATCTTTTTTCTGCTCTTCAACGGAAAGGTATATTTACCTTCAAGGATGACAAAAGGCTCGAGAAAGGAGAAGCCATTAAACCTGAGCTCCTCAAAGCAATTGAGCAATCCCGAATTTCTTATGTCGTCTTCTCCCAAAACTATGCTGAATCGTCATGGTGCTTGGATGAACTGGCAAAGATATCTGAGGGAATTAGCGAACCGGGATACTTTATTGTGCCGATTTTCTTCGATGTCGATCCATCTGATGTTCGAAGACAGGGTGGGAAATTTAAAGAATTCTTTGATAAACATGAAAGAGAGTTTAGTGATAATATAGATAAGGTACAGAGATGGAGGATTGCATTGACTCAAGTAGGCAGTCTCGCTGGTTATGATGTACGGGCTAAATCAGAGTCAGATATTATTGATGAAATTGTTACAGATGCAATACGCAAATTGGGTCATAGATTCTCAAGTCTGGCTGATGATCTAGTTGGGATGCAACCTCGTGCAGAAGCATTTGAAAACCTGTTAGATTTAGAATCAGAAGATGTTCGAAAGGTTGGGATGTGGGGGATGCCTGGAGTAGGGAAGACTACTTTAGCTGCAGTTGTATATGATAGAATCTCTCACCGATTTGATGCTTGTTGTCTTCTTCTTGATGTAAGTAAAGTTCACAAGGGTCCTGGACTTGTACGTCTGCAAAAGCAACTCCTCCGTGAAACACTGTTGGAAGATATAGAGGTATGGGAGGATCACAGGGGAACCAATTTAATAAGCACTAGGCTTCTCCACCTAAAAACTCTTATTGTTGTTGACAATGTTGATCATGCTGATCAATTGGAGAAACTGGTTGGAAAGTCCAAATGGTTCGGGCCAGGGAGTAGGATCATCATAACAACTAGAGATGCGCATATCCTAACCAGGCATGGAGTGGATGAAGTTTACGAGGTTAAACTACTGAATGATGATGAAGCTCTTCAGCTTCTCTGTAGAAGAGCCTTCAAACAAGATGATCCTTTGAGTGACTTCAAAGTTATGACTTATAGTCTGCTACAATATGCTAAAGCCCTTCCACTAGTGATCAAAGTGTTAGGTTCCTTTATGTATGGGCTGGAAATATCAGAGTGGATTGATCAGTTAGAGAGGTTGAAAGAAAATCCTGACCAAGAGGTTATGGGAGTTCTTGAAACAAGTTTTGTTCGGCTTGAGAAAAAGGACAGGGATATATTTATAGACATTGCTTGTTTCTTTAAGGGAGCAGATGAGAACAATGTGACAAAAATTCTAGAACATTGTGGATTCAATCCAAAGATTGGAATTAGAGTTCTCCGTGACAGATCACTCCTGAACACTGTCAATGGAACATTCTGGATGCATGATATGCTGCAAGAACTGGGATGGAAATTTGCAAAGGGAGAATTTCCTGATGAGCCGGCAAAGTGGAGTAGGCTGTGGTCATACAAAGATATTCAAACTGTAAAGACAGGAACGGAAAAAGTTGAAGCCATCGTCCTGAGCCCAGATGATCTGCAAGAGACGCCATTGAAGGCTGAAGCTTTATCACAAATGAGCCGCCTCAGACTAATCATATTCCCTAATAATGTGAAATTTTCAGGAAACCTCAATAACCTGTCCAACGAGTTACGAGTTCTTTCATGGCATAAATTTCCTTTCAGCTCTTTGCCATCAAGTTTTGAACCTGATAAACTTGTTGAACTGATCATGCCTGACAGCAACGTAAAACAACTATGGGAAGGCAAAAAGCGATTGCCAAAGTTGAGAAACATGGATCTACGTGGCTCTAAAAGTCTAATCAAGACGCCAAATGTTAAAGGAGTAGAAAATCTTGAGAGGTTAGATCTTGAAGGATGTACTGGATTATTGCAGGTCGATTCGTCAGTTGGAGATCTTAAAAGGATCACGTTCCTGAATTTGAGAAACTGTGATCATCTAATCAGTATCCCAAACACCTTATTTCTGTTAACTTCTCTTGATATTCTAAACCTGGCTGGTTGTTCAAGACTTGCAAAATGGTTGAACTTCGAAGGACCTCGATAG 2148 0.4083 MNYPIFPGCSSSRRTWKYEVFLSFRGEDTRNSFAGHLFSALQRKGIFTFKDDKRLEKGEAIKPELLKAIEQSRISYVVFSQNYAESSWCLDELAKISEGISEPGYFIVPIFFDVDPSDVRRQGGKFKEFFDKHEREFSDNIDKVQRWRIALTQVGSLAGYDVRAKSESDIIDEIVTDAIRKLGHRFSSLADDLVGMQPRAEAFENLLDLESEDVRKVGMWGMPGVGKTTLAAVVYDRISHRFDACCLLLDVSKVHKGPGLVRLQKQLLRETLLEDIEVWEDHRGTNLISTRLLHLKTLIVVDNVDHADQLEKLVGKSKWFGPGSRIIITTRDAHILTRHGVDEVYEVKLLNDDEALQLLCRRAFKQDDPLSDFKVMTYSLLQYAKALPLVIKVLGSFMYGLEISEWIDQLERLKENPDQEVMGVLETSFVRLEKKDRDIFIDIACFFKGADENNVTKILEHCGFNPKIGIRVLRDRSLLNTVNGTFWMHDMLQELGWKFAKGEFPDEPAKWSRLWSYKDIQTVKTGTEKVEAIVLSPDDLQETPLKAEALSQMSRLRLIIFPNNVKFSGNLNNLSNELRVLSWHKFPFSSLPSSFEPDKLVELIMPDSNVKQLWEGKKRLPKLRNMDLRGSKSLIKTPNVKGVENLERLDLEGCTGLLQVDSSVGDLKRITFLNLRNCDHLISIPNTLFLLTSLDILNLAGCSRLAKWLNFEGPR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0623 715 Pfam Leucine Rich Repeat 599 618 IPR011713 -
Alju02g0623 715 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 709 IPR044974 GO:0006952
Alju02g0623 715 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Alju02g0623 715 Gene3D - 14 184 IPR035897 -
Alju02g0623 715 Gene3D - 185 345 IPR027417 -
Alju02g0623 715 Pfam TIR domain 17 192 IPR000157 GO:0007165
Alju02g0623 715 SUPERFAMILY "Winged helix" DNA-binding domain 420 521 IPR036390 -
Alju02g0623 715 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Alju02g0623 715 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Alju02g0623 715 Gene3D - 349 433 IPR042197 -
Alju02g0623 715 PRINTS Disease resistance protein signature 618 634 - -
Alju02g0623 715 PRINTS Disease resistance protein signature 216 231 - -
Alju02g0623 715 PRINTS Disease resistance protein signature 291 305 - -
Alju02g0623 715 PRINTS Disease resistance protein signature 384 398 - -
Alju02g0623 715 SMART till_3 17 157 IPR000157 GO:0007165
Alju02g0623 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Alju02g0623 715 Gene3D Ribonuclease Inhibitor 515 711 IPR032675 -
Alju02g0623 715 SUPERFAMILY L domain-like 502 704 - -
Alju02g0623 715 Pfam NB-ARC domain 210 416 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0623 Alju-ChrAlju02 4545535 4548184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0623 6 708 WRKY Transcription Factor Family AT4G12020 32.320 6.50e-100 335