Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0621 ATGAACAGAAATTCCAACAATTTCACACCTTTACCTGGTGCTAGGCGATCTGTTGCAAGACCCTATGATAATTATAGAAGCTACGAAGAGACTCCCGTGTTCTACCAACCTCTTTCTATCCAAGCTACTCCTGATGACAGGATGGCAAGCGTGCAAGACACCCCAAGGTTGATGGAATACAGAACACGGTCAGGACTCAACACACCCAGTTTTCCAACACAACCACATAGCAGACGACAAATTAACGGATTCAGTGAGAGCATGAGAAGGGGGTTGAACCCCATGTTCGGAGAGACTGTCCAGCAGCCACCTCCAAGAACCGTAGAAAATCCAAATTCTGCAGTTTTGAGCAAGCTGAAGAAAGAAATGTATGAGCCCCCAAAGATTTTACCAAAGAGAGTGAGCTTATGCTATAAAGACAGTGTTGCGAAAGCTTTAAAAGAGAGAGAGAGGGAAAAGCAAGAACGTCGCAAGAGGTGTGCTATTTGCCTGGAAGATTTTGAACCTCGAGAGGAGGTGATGCTCACACCATGCAAACACGTGTTTCATGAGGATTGTATCGTACCATGGGTAAGAAGCAAGGGCCAGTGCCCTGTGTGCAGGTTTGTGATTTGTGAGGAGACGAGAGAACACACTTCATCCTTCAACGACGACATGGCCATGATGGCACCCAGTGACCTTCTAATTTCAGGCGAGCTTCTATCAGTTTTCAGAGCCATGCGACAAGCTCTCGAAATCGGCAATGGAACTCAGTAA 756 0.4643 MNRNSNNFTPLPGARRSVARPYDNYRSYEETPVFYQPLSIQATPDDRMASVQDTPRLMEYRTRSGLNTPSFPTQPHSRRQINGFSESMRRGLNPMFGETVQQPPPRTVENPNSAVLSKLKKEMYEPPKILPKRVSLCYKDSVAKALKEREREKQERRKRCAICLEDFEPREEVMLTPCKHVFHEDCIVPWVRSKGQCPVCRFVICEETREHTSSFNDDMAMMAPSDLLISGELLSVFRAMRQALEIGNGTQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0621 251 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 74 202 - -
Alju02g0621 251 Pfam Ring finger domain 159 201 IPR001841 -
Alju02g0621 251 SMART ringv_2 159 201 IPR011016 GO:0008270
Alju02g0621 251 ProSiteProfiles Zinc finger RING-type profile. 160 201 IPR001841 -
Alju02g0621 251 FunFam RING/U-box superfamily protein 144 218 - -
Alju02g0621 251 SMART ring_2 160 200 IPR001841 -
Alju02g0621 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 218 IPR013083 -
Alju02g0621 251 SUPERFAMILY RING/U-box 159 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0621 Alju-ChrAlju02 4543137 4544330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0621 110 248 C3H Transcription Factor Family AT3G58720 45.205 1.05e-35 126