Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0613 ATGCCCTTTGGGCCGCACCACCATCAACCACCTCCAGCGATCGCTCCCCAACTACCACCACTACAGGCACAATCTGAAAATGACTCGCTGAAGGTGTCTGCTCGCCGTGGCTCCGATATGGAGACCGATAAGGAAATGTCAGCTACTGTTGCCGAGGGGAATGATGCAATCACTGGTCACATAATATCCACCACAGTTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGGGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCGAAGTGCTTGGAGACTGGGGAAACAGTGGCTATAAAGAAGGTCTTACAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGTTTAATGGATCACCCAAATGTAATTTCTCTGAAGCACTGTTTCTTCTCTACAACTAGCAGAGATGAACTTTTTCTGAACTTGGTTATGGAATATGTACCTGAAACAATGTATCGAGTTCTAAAACACTACAGTAGTATGAACCAGAGGATGCCCCTCATCTATGTGAAACTTTACACTTACCAAATCTTTAGGGGGCTGGCATATATCCATACTGTACCTGGAGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCAAAAGTTTTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCGCGTTACTATCGAGCTCCAGAACTAATATTCGGTGCAACAGAATACACGACTTCAATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGCACACCAACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACTGATTTTAGATTTCCCCAGATTAAAGCTCACCCTTGGCACAAGGTTTTTCATAAGCGAATGCCTCCTGAAGCGATTGACCTTGCCTCAAGGCTTCTCCAATATTCACCCAGTCTTCGATGTACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGACTACCTAATGGCCGCCCACTGCCCCCCCTTTTCAACTTTAAACAAGAACTGTCCGGAGCATCACCTGAATTGATCAGTAAGCTCATCCCAGAGCATGTTAGGCGGCAGAGTATTCTGGGCTTCCAGATTCCACCTGGTACATAG 1260 0.454 MPFGPHHHQPPPAIAPQLPPLQAQSENDSLKVSARRGSDMETDKEMSATVAEGNDAITGHIISTTVGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQIPPGT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0613 419 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Alju02g0613 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Alju02g0613 419 SMART serkin_6 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0613 419 SUPERFAMILY Protein kinase-like (PK-like) 78 390 IPR011009 -
Alju02g0613 419 MobiDBLite consensus disorder prediction 1 18 - -
Alju02g0613 419 FunFam Shaggy-related protein kinase kappa 159 406 - -
Alju02g0613 419 CDD STKc_GSK3 74 366 IPR039192 -
Alju02g0613 419 FunFam Glycogen synthase kinase-3 beta 63 158 - -
Alju02g0613 419 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 43 408 - -
Alju02g0613 419 Gene3D Transferase(Phosphotransferase) domain 1 159 406 - -
Alju02g0613 419 ProSiteProfiles Protein kinase domain profile. 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0613 419 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
Alju02g0613 419 MobiDBLite consensus disorder prediction 1 44 - -
Alju02g0613 419 Pfam Protein kinase domain 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0613 Alju-ChrAlju02 4505467 4510200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0613 83 401 MAP Kinase Gene Family AT3G59790 35.329 2.67e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Alju02g0613 Pkinase 5.2e-64 CL0016