Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0610 ATGTCTGGAGTTGGTCCTATTAGTCAGGATTGGGAGCCGGTGGTGATCAGGAAGAATGCTCCGACTGCTGCCGCCTTGAAGGACGAGAAAGCCGTCAATGCTGCTCGCCGCGCTGGCGCCGAGGTCCAGACCGTCAAGAAATATGAACGTGTGCCAACTGAACTCAAGAAAGCTATTATGCAAGTTCGGATGGACAAGAAACTTACCCAGGCACAGCTCGCTCAGATAATTAATGAGAAACCTCAAGTGATTCAGGAGTACGAATCAGGAAAAGCCATTCCAAACCAACAGATAATTAACAAGCTGGAGAGGGCCCTTGGTGTGCTAAACGGCGCGGCAAGAACTAGGGCAGAGAATATGACGGTTTCAAGGTGGAACATGCATGTTAATTGA 393 0.4936 MSGVGPISQDWEPVVIRKNAPTAAALKDEKAVNAARRAGAEVQTVKKYERVPTELKKAIMQVRMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIINKLERALGVLNGAARTRAENMTVSRWNMHVN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0610 130 SUPERFAMILY lambda repressor-like DNA-binding domains 53 108 IPR010982 GO:0003677
Alju02g0610 130 SMART mbf_short4 58 113 IPR001387 -
Alju02g0610 130 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 49 - -
Alju02g0610 130 Pfam Helix-turn-helix 59 108 IPR001387 -
Alju02g0610 130 FunFam Multiprotein bridging factor 1 43 114 - -
Alju02g0610 130 Pfam Multiprotein bridging factor 1 9 49 IPR013729 -
Alju02g0610 130 CDD HTH_XRE 57 108 IPR001387 -
Alju02g0610 130 Gene3D - 35 123 IPR010982 GO:0003677
Alju02g0610 130 ProSiteProfiles Cro/C1-type HTH domain profile. 59 112 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0610 Alju-ChrAlju02 4483827 4485994 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Alju02g0610 HTH_3 5.5e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0610 02 4483827 4485994 Alju02g0610 02 4483827 4485994 ECH