Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0608 ATGGCAGAGAATATATACCACATATCTAACGAGGACGACAAGAGCGAAGGTAGTGATGAATTGGAGGCGAGACCTAATAAGAAACGTTCATTGTTGGACTTGAATGAAGAAGCAGTGGGTGAGGAAGAAGATGAGACAAGTAATGAAGAAGGGAACATGAGCAGCAATAACTCGTCAAGCACAGATCAAGTGGTGAGAGAAAGAACAACAACGAGTGGTGTGAGGCAATACGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTCGCTTTTGTCCTTGCTGTTGAGAAGCTTGGTGGTCAAGAAAGAGCAACTCCAAAGTTGGTTCTTCAGCTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAGGTGTTATCTCAAAATAGAGGAATGCAGGGAAGAGCACATATTAAGGAGATGTACGAAAGATATAATAAAGTCCAATGTCACTTTGGGATAGATAACAGAAACATTCAACCCTACTCATCCGTATTAATGAAACATCCTTATGACTACTTCAAAGCCCCAGATCACTCTTCAAGGTTTCAGCCATGTGGGACAGTGAATAACCAGTGGACAAGATCAAGTTCAGAGTGGAGCAATATTAAGAGGATAGGGAAATCGCACCTATTTGATGTAAGGGATGCAATAACAAGAAGTGGATCTATTGGGTGTAGAGAATTTATTGAAGGAAAGGGATGGACTCATCGTGAAATACTTGGAGTTGGATCACAAGTCAGTGATGGACTAGGGATTTCAAATTGGGACGACAAGTATAATAATTCTCCTCTATGGAGAACCAAATCTAGGTTTATCCATGATAAATGCCAACGTGGTTCTAGTTCTACATTCTTATCCACAGCTCATGCGCAATTTGATGCTAAGGTTCATGATATAAAAGATGGAATCATGCGGTGTATCAACGAGGAGGAGCTATCACGAGGGGGTGAGGTGAAAGCCCAGATATCATCAGCAGAGAGGTTGAAGGAGAAGAAAGGGTCAGCTACAAGTACAAGTTTCTTAGAGTTAAGTTTAAGCCATGACTTTGGAAGCATTAGAGATATGAACGTGGTCTCAGGTCCAAAAACCGATGATCAAGTTAATACGAAGCTTTCTCTTTCGTTGTTGTGA 1194 0.4154 MAENIYHISNEDDKSEGSDELEARPNKKRSLLDLNEEAVGEEEDETSNEEGNMSSNNSSSTDQVVRERTTTSGVRQYVRSKMPRLRWTPDLHLAFVLAVEKLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRGMQGRAHIKEMYERYNKVQCHFGIDNRNIQPYSSVLMKHPYDYFKAPDHSSRFQPCGTVNNQWTRSSSEWSNIKRIGKSHLFDVRDAITRSGSIGCREFIEGKGWTHREILGVGSQVSDGLGISNWDDKYNNSPLWRTKSRFIHDKCQRGSSSTFLSTAHAQFDAKVHDIKDGIMRCINEEELSRGGEVKAQISSAERLKEKKGSATSTSFLELSLSHDFGSIRDMNVVSGPKTDDQVNTKLSLSLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0608 397 MobiDBLite consensus disorder prediction 50 73 - -
Alju02g0608 397 MobiDBLite consensus disorder prediction 1 36 - -
Alju02g0608 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 139 IPR017930 -
Alju02g0608 397 Pfam Myb-like DNA-binding domain 85 135 IPR001005 -
Alju02g0608 397 NCBIfam myb-like DNA-binding domain, SHAQKYF class 83 138 IPR006447 GO:0003677
Alju02g0608 397 SUPERFAMILY Homeodomain-like 81 137 IPR009057 -
Alju02g0608 397 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 60 168 IPR046955 GO:0003700
Alju02g0608 397 MobiDBLite consensus disorder prediction 1 73 - -
Alju02g0608 397 Gene3D - 82 139 - -
Alju02g0608 397 FunFam Myb family transcription factor 81 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0608 Alju-ChrAlju02 4453908 4456626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0608 25 144 G2-like Transcription Factor Family AT2G42660 57.500 7.68e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju02g0608 Myb_DNA-binding 9.9e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0608 02 4453908 4456626 Alju02g0608 02 4453908 4456626 ECH