Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0600 ATGGCGGAGACACGAGAGGATTCAGGGCCCACAGAGCAAGGGCCCTCTAATGCTTCATGGTGGCCTTCAGAGTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGATCTCAAGATGAGGCCCTAAACAATAAAGAATCACCTAGACATTCAGGGCTAGGTGATTTGTCACCTTATAGAGCATCTCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAGCTTTTTCATAATATTCCTACCTTGGAAGAGCTTCTTGCTTTGGGAGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATGCTGAAAAAGATAAAAAGCTATCCATGTTGAAACAGCTGGTGGTGGCGCTAGTTAAAGGATTGAACTCAAATCCAGCTGCAGTTATTAAGAAAATAGCAGGATTAGTTGCTGATTTTTGCAAGCGGCCAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAACCTCCCACATGTTTGAGAGTCGAAGCGTCCAGTTACTGGGGCAGATAAAGCATGGTTCATGTCGTCCTCGAGCGATCTTGTTTAAAGTTCTAGCTGATGCTGTAGGCCTTGAAAGTAAACTAATGGTGGGTTTGCCAGACGATGGGGTCCCTGAATGTGCAGATTCATACAAGCATTTGTCTGTCGTAGTTGTATTAAATTCTGTGGAGCTATTGGTTGATCTCATGCGATTCCCTGGCCAATTATATCCACAGTCAACCAAAGCAATTTATATGACGCATATTTCTGCAGCCGGAGAGAGTGATTCTGCTGAGAATGATTCCTGTGATTCACCATTAGAACCCAACAGTCCTTTATATGGGGTTTCAGAGAAAGTAGATATTGACAGTGTTGAAAGAGAGGAAAATCTCCAATTTCACAGAAGACACGAAGCATCTTCAAATGTATCAGGCATTTCTTTACGAAATGCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCGTTTGGTCGGCGTAGTCGGAGAAGAGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGCGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCTGATGACGGGACTACATCAAGCTATAGGTCAAATGGTGCGCCCTCATCAGAAGCTCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGCCTTTTGAGAGAGCAGAGGGATGATCGGTCCTTCTCACATTCTCCAACTGATAGAAGTAGCGGTGGCGATCTTCAGAAAAATGTTTCAAACTTCCATCTTGGTCATGATGAAAGATCTGCTTTATATTCTCTTAAGCATGACCAAGAATCTTCTCAAAAGGCAATGTCGTTACCCTCTTCCCCACATGAATATAGGGGTGAAGCATCTGGGAGACCATCAGGATATGGAGTAAATAATGAGCTACAAGCAACTTGGAACAGAGTCCTCGAGTCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGGACTCGTGTTGGGATTGGGTTCTTTGGAGAGGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTGACCACTGAAAACATGGAAGATTTCTGCAATGAGATAACGATTCTCAGCCGGCTTCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAGTACATGGAGATGGGATCTTTGTATTACTTGATCCATTCAAGTGGTCAAAAGAAGAAGCTTAGTTGGCAGAGAAGACTGAAGATGCTACGGGATATATGCAGGGGGCTGATGTGCATACATCGTATGAAGATAGTTCACCGCGACCTGAAAAGTGCCAATTGTCTTGTGAACAAGCATTGGACTGTTAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGAGTCTCCCATGAAAGATTCTTCATCAGCGGGAACTCCAGAATGGATGGCTCCTGAACTTGTTCGAAACGAACCATGCACGGAAAAATGTGACATCTTTAGCCTGGGGGTCATAATGTGGGAGCTTTGCACTCTAAGCAGGCCCTGGGAAGGCGTACCACCTCAGAGGGTAATTTATGCCGTTGCTAACGAGGGATCCAGACTGGAGATTCCTGAGGGTCCACTGGGCAGGCTGATTTCAGATTGTTGGGCAGAGCCTCATGAACGGCCAAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCATTGTGCTAA 2448 0.4371 MAETREDSGPTEQGPSNASWWPSEFVEKFGSVSLGSQDEALNNKESPRHSGLGDLSPYRASQILWRTGMLSEPIPNGFYSVIPEKRLKELFHNIPTLEELLALGGEGFRADIILVDAEKDKKLSMLKQLVVALVKGLNSNPAAVIKKIAGLVADFCKRPNVESPAKAALEETSHMFESRSVQLLGQIKHGSCRPRAILFKVLADAVGLESKLMVGLPDDGVPECADSYKHLSVVVVLNSVELLVDLMRFPGQLYPQSTKAIYMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDIDSVEREENLQFHRRHEASSNVSGISLRNAMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRDFADDGTTSSYRSNGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDRSFSHSPTDRSSGGDLQKNVSNFHLGHDERSALYSLKHDQESSQKAMSLPSSPHEYRGEASGRPSGYGVNNELQATWNRVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHSSGQKKKLSWQRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMKDSSSAGTPEWMAPELVRNEPCTEKCDIFSLGVIMWELCTLSRPWEGVPPQRVIYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEDILSRLLDCEYSLC 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0600 815 Gene3D Transferase(Phosphotransferase) domain 1 638 813 - -
Alju02g0600 815 MobiDBLite consensus disorder prediction 492 523 - -
Alju02g0600 815 CDD STKc_MAP3K-like 565 807 - -
Alju02g0600 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Alju02g0600 815 MobiDBLite consensus disorder prediction 446 461 - -
Alju02g0600 815 MobiDBLite consensus disorder prediction 361 420 - -
Alju02g0600 815 MobiDBLite consensus disorder prediction 446 476 - -
Alju02g0600 815 MobiDBLite consensus disorder prediction 1 21 - -
Alju02g0600 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Alju02g0600 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 341 807 - -
Alju02g0600 815 FunFam Serine/threonine-protein kinase isoform 1 549 637 - -
Alju02g0600 815 Pfam Protein tyrosine and serine/threonine kinase 560 807 IPR001245 GO:0004672|GO:0006468
Alju02g0600 815 ProSiteProfiles Protein kinase domain profile. 559 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0600 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Alju02g0600 815 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Alju02g0600 815 SUPERFAMILY Protein kinase-like (PK-like) 533 807 IPR011009 -
Alju02g0600 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0600 Alju-ChrAlju02 4392219 4405515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0600 1 815 MAP Kinase Kinase Kinase AT3G58640 70.991 0.0 1192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Alju02g0600 PK_Tyr_Ser-Thr 4.7e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0600 02 4392219 4405515 Alju10g0837 10 7463208 7472915 CCT
Alju02g0600 02 4392219 4405515 Alju02g0600 02 4392219 4405515 ECH