Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0599 ATGGAATCCCCGGTGGGAGCTCCGTCGCCCCCCTCCACTGCTCCGTCCCGCTCGTCGCCGTTTCCCGGACGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCATGGGGTGAACGTCACCTTGAGCTTAATCGAGGAAACCTCCGTCAGAAGCACTGGCAAGAAGTCGCCGACGCCGTTAACGCTAATCATGGCCACGTCAAGAAAGCGCGCCGAACAGACGTCCAGTGCAAGAACCGCATCGACACTCTGAAGAAGAAGTATAAGATCGAGAAGAACAAGGTCATCGATTTCGACGGGAACTACACTAGCCCTTGGCCCTTCTTCGACCGCCTTGACGCTCTCATCGGCGATGCGTTTCCAGTTAAGATACTTCCGCCGGCGATCGATAGCAGCCGCCGTATGTCCCATCCCGTGAAGTCTCCGTCATGGGTAATGTCACAGGTGCCTGTCGGGCCCCGATCCGGCACTCAGAAACGGCCGGCGTTGCCAGCGACGGCGCCGGCTCCGGCTCCGGCTCCGGCGAGAATGAAAGGTTCGTCTTTCCGTCGGAACTTTTCGGCTTTTGCAGAGGCGGCTGCTGCAGCGGCCAAGGCAGGGGATGCAAATAGTGACGATTCGGATGAGTCAAGGTCAAGTAGTGCCACTGGGAGTAGAAAGAGAGGAAGAGAAAGAGAGAAAAAGAGGGAAAGCGACGAGGATTCAGAATTTGGGTACAGAGAACTGGCACAAGCAATAGAGAGGTTCGGAGAGATATACGAGAGAGTAGAAGCGGCGAAGCAAAGGCAAATGGTGGAGTTAGAGAAACAGAGGATGCAATTTGCGAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACGCAGGTTCAGCTTCAAAAAATCAAGCGCGCCAAGCGATCCTCTCAGGCTGGTGAGTCTTGTCAATTTTTATGTTTATCATTTGAGCCATCACTGCAAATGCTACGGTGCTCATTTTTGCTTAATTCTTTTGATTTCATGTCATTATTCTGTCAGTTTGGACCACATTAA 1047 0.5301 MESPVGAPSPPSTAPSRSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIDFDGNYTSPWPFFDRLDALIGDAFPVKILPPAIDSSRRMSHPVKSPSWVMSQVPVGPRSGTQKRPALPATAPAPAPAPARMKGSSFRRNFSAFAEAAAAAAKAGDANSDDSDESRSSSATGSRKRGREREKKRESDEDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETQVQLQKIKRAKRSSQAGESCQFLCLSFEPSLQMLRCSFLLNSFDFMSLFCQFGPH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0599 348 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 305 IPR044823 -
Alju02g0599 348 MobiDBLite consensus disorder prediction 1 26 - -
Alju02g0599 348 MobiDBLite consensus disorder prediction 1 17 - -
Alju02g0599 348 MobiDBLite consensus disorder prediction 136 183 - -
Alju02g0599 348 Coils Coil 257 277 - -
Alju02g0599 348 Gene3D - 28 94 - -
Alju02g0599 348 MobiDBLite consensus disorder prediction 206 240 - -
Alju02g0599 348 MobiDBLite consensus disorder prediction 202 240 - -
Alju02g0599 348 FunFam trihelix transcription factor ASIL2 28 94 - -
Alju02g0599 348 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
Alju02g0599 348 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0599 Alju-ChrAlju02 4388828 4389874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0599 224 302 Trihelix Transcription Factor Family AT3G14180 46.835 7.38e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g0599 Myb_DNA-bind_4 5.8e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0599 02 4388828 4389874 Alju02g0599 02 4388828 4389874 ECH