Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0591 ATGTCGCAATCTGGGAAGTCTGTGCGAGACCTGGGCTATGACTCTCTTACGACTCGATTCCGTGATTCGCTGACTTGTGAAGAGAACAAGCCCGATTTCAAAGAACTCGATCTGGGTTCGTTCATTTCACCATTGAAAATCCACGGCACAGGTAATGCTGGCAGCGGCGGTGGAGCGGCTGCCACTTCAAGCTCGAGTTCGAGTTCCTCCGGCTCAGTCACAGGCAGAAGCAACGCCCCCAAGTTGCCCAGAAGACCTGACGGAAAACCAAACCACCATTCCGGAGAGCTCACGAGTTATTTCGATACCAGCCCGAATGCCTCAGAGAGCCTCCGATCCGCTTCGGCGACGAGCAATTCCAAGCCGGGTCATCGGAGATCAGTTTCGGCTGGAGCCCCATTAATATACTCCGGCGGAAGTCATAGCAGCCCGGGCAGTAATAATTGCTCGAACACTGCAACTTCAGGGACCAATTTATTTCCAACTGGTAATATTTGTCCCTCCGGGAAGATCCTAAAATCGAGTATGGTGTCTCGAGCTCCCAATAGAACTGATGTGTTGGGTTCTGGAACGGCAAACTATGGCCATGGTAATATAATGCGTGGTGGTGCGAAATTGAGCAATCCTGGGCACGTCGTGGATGACAATGGGGCTGGGAATTCTCAGCTTGGTGTAGCATCGGGGGTCGTTAGACGAACAATGAGTGGTTCTGATCCAGAAGAGATGAAGAAGACTGGGAATGAGTTGTATAGAAGCGGTAATTTTGTGGAGGCATTGTCATTTTACGATCGTGCTATTTCGATATTGCCTAATAATGCAGCCTACTGGAGTAACCGGGCAGCGGCGTTGACGGCGTTGGGGAGACTGGCCGAGGCAGCGAAGGAGTGCGAAGAGGCTGTGAAGTTGGAACCTAATTATACCCGGGCTCATCAAAGGCTGGCTTCTCTTTGCCTGCGCTTTGGACGTATCGAACTTGCCAAGCGCCACCTCTATCTCCCTGGGCAACATGTGGATCAATCTGAAATGCAGAAGCTGAGGTTATTGGAGAAACATATAAATCAATGTGCAGAGGCGAGAAAGGTTGGTGATTGGAAGATTGCACTTGGGGAATCAAATGCAGCGATTGCAGTTGGAGCAGATTTCTCACCTGAGCTTGTTGCTTGTAAAGTGGAAGCTTATTTAAAACTCCATCAACTTGAGGATGCTGAGTCCAGTCTCTCAAACATTCCAAAGTTGGAACGTTGTTCTTTATCCTGCTCTCAAACCAGGTTCTTTGGTATGGTTGGTGAAGCCTATGTGCACTTCGTTCATGCTCAGGTTCATATGGCCATGGGAAGATTTGAGAATGCGATATCAGCAGCTGAGAAGGCTAGACTGTTAGATTACAGCAATGTAGAAATTGATAGGGTTCTAAATACTGTGAAAATGGTAGCAAGAGCTCGCTCAAAGGGCAATGATCTCTTTAGCTCCGGCAAATTTTCTGAAGCTTGTTCTGCTTATGGGGAAGGCCTCAAATATGACAGCTACAACTATGTTCTGTATTGTAATAGAGCTGTTTGTTGGTCTAAACTAGGACTATGGGAAAAATCTGTTGAAGACTGTAACCAAGCTCTCAACATTCAACCAAATTACACCAAGGCCCTCTTTCGCAGGGCTGCATCAAATGCAAAGCTTGAAAGATGGGCTGAAGTTGTGAAAGATTATGAGACCTTAAAACAAGAACTCCCGGGAGACAATGAAGTTGTTGAATCCCTTCGTAAGGCTCAGCTAGCTTTAATAAAATCTCGTGGAGAGGACCATGCTGGAAAGCTTGAAGTTGAAGTTGGAGCTGTCTCTTCATTGGATGAATTTAAAGCTGCTATTGCTTCTGCTGGTATTTCAGTAGTTCATTTCAAAGAGTCGTCGGATGAACTAAGCGGAGAAATATCCCCATTCATAAATATGCTGTGCGTCAGATACCCATCTGTTAAATTTATCAAGGTTGATGTGGAGGAGTATTTAGCTATAGCAAAAGCTGAGAGCATAAGAACTGTCCCAACGTTCAAAATTTATAAAAATGGAACCAAGGTGAAGGAGATGATTCGGCCAACGCATAAGTTGTTAGAGGAGTCAGTGAGAAGCTGTAGCTCCCTCTGA 2136 0.4649 MSQSGKSVRDLGYDSLTTRFRDSLTCEENKPDFKELDLGSFISPLKIHGTGNAGSGGGAAATSSSSSSSSGSVTGRSNAPKLPRRPDGKPNHHSGELTSYFDTSPNASESLRSASATSNSKPGHRRSVSAGAPLIYSGGSHSSPGSNNCSNTATSGTNLFPTGNICPSGKILKSSMVSRAPNRTDVLGSGTANYGHGNIMRGGAKLSNPGHVVDDNGAGNSQLGVASGVVRRTMSGSDPEEMKKTGNELYRSGNFVEALSFYDRAISILPNNAAYWSNRAAALTALGRLAEAAKECEEAVKLEPNYTRAHQRLASLCLRFGRIELAKRHLYLPGQHVDQSEMQKLRLLEKHINQCAEARKVGDWKIALGESNAAIAVGADFSPELVACKVEAYLKLHQLEDAESSLSNIPKLERCSLSCSQTRFFGMVGEAYVHFVHAQVHMAMGRFENAISAAEKARLLDYSNVEIDRVLNTVKMVARARSKGNDLFSSGKFSEACSAYGEGLKYDSYNYVLYCNRAVCWSKLGLWEKSVEDCNQALNIQPNYTKALFRRAASNAKLERWAEVVKDYETLKQELPGDNEVVESLRKAQLALIKSRGEDHAGKLEVEVGAVSSLDEFKAAIASAGISVVHFKESSDELSGEISPFINMLCVRYPSVKFIKVDVEEYLAIAKAESIRTVPTFKIYKNGTKVKEMIRPTHKLLEESVRSCSSL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0591 711 Pfam Thioredoxin 615 696 IPR013766 -
Alju02g0591 711 Gene3D Tetratricopeptide repeat domain 237 596 IPR011990 GO:0005515
Alju02g0591 711 MobiDBLite consensus disorder prediction 44 150 - -
Alju02g0591 711 Pfam Tetratricopeptide repeat 433 457 IPR019734 GO:0005515
Alju02g0591 711 Pfam Tetratricopeptide repeat 273 306 IPR013105 -
Alju02g0591 711 CDD TRX_family 615 702 - -
Alju02g0591 711 SUPERFAMILY TPR-like 240 329 IPR011990 GO:0005515
Alju02g0591 711 MobiDBLite consensus disorder prediction 96 125 - -
Alju02g0591 711 ProSiteProfiles TPR repeat profile. 239 272 IPR019734 GO:0005515
Alju02g0591 711 FunFam TPR repeat-containing thioredoxin TTL4 603 709 - -
Alju02g0591 711 SUPERFAMILY TPR-like 476 589 IPR011990 GO:0005515
Alju02g0591 711 SMART tpr_5 239 272 IPR019734 GO:0005515
Alju02g0591 711 SMART tpr_5 511 544 IPR019734 GO:0005515
Alju02g0591 711 SMART tpr_5 273 306 IPR019734 GO:0005515
Alju02g0591 711 SMART tpr_5 431 464 IPR019734 GO:0005515
Alju02g0591 711 SMART tpr_5 477 510 IPR019734 GO:0005515
Alju02g0591 711 SMART tpr_5 545 578 IPR019734 GO:0005515
Alju02g0591 711 Gene3D Glutaredoxin 597 708 - -
Alju02g0591 711 MobiDBLite consensus disorder prediction 56 77 - -
Alju02g0591 711 ProSiteProfiles TPR repeat profile. 273 306 IPR019734 GO:0005515
Alju02g0591 711 SUPERFAMILY Thioredoxin-like 611 696 IPR036249 -
Alju02g0591 711 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 706 IPR044534 -
Alju02g0591 711 SUPERFAMILY TPR-like 348 471 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0591 Alju-ChrAlju02 4310166 4313239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0591 224 313 U-box Gene Family AT3G07370 31.111 9.19e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g1114 10 11151253 11154581 Alju02g0591 02 4310166 4313239 CCT
Alju02g0591 02 4310166 4313239 Alju02g0591 02 4310166 4313239 ECH