Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0584 ATGGAACTCACAGAGAGTAGCAAAATAATGGAAGGTTTTGATTGGAGTTCAGGCATCTGTGGAAATGCCTCAGAGAAAAGTGGTAGCCATGGTTTCACAGTTAATTCTGGTGTTATAGAAAATGGGTTTGCTTCATCTTCTTCTCTGGTTTTGTATAACCAGATAGGTGAGCTCGTGGAGGCTTCTGTCAAAGATCGAAACAAGGGCCTGTCCTCTGAGAGGAGCGTAGCTGCTTTGAAGAACCATAGCGAAGCAGAACGCAGGAGAAGAGCAAGGATCAATGCTCATCTTGATACACTTCGCACCGTGATTCCAGGTGCCAACAAGATGGACAAAGCATCATTACTTGCAGAGGTGATCACACATCTGAAAGAGCTAAAAGGGAATGCGGCACAAGCTTGTGAAGGTTTAATGGTACCAAAGGACAGTGATGAGATAAGAGTTGAAGAACAAGAGGGTGGTTCTAATGGTTTTCCTTATTCAATTAGGGCATCTCTGTGTTGTGAGTACAAACCTGGGTTATTGTCTGACATAAGACAAGCAATTGAAGGTCTTCATATGATGATAATGAAGGCAGAAATTGCGACCTTGGGAGGGAGGATGAAGAACGTGTTTGTGATAATAAGCTGCAGAGAGCACAACAACATTGAAGAAGACTGTGAGTATAGACAGTTTCTTGCTGGTTCTGTTCATCAAGCTCTCAAGTCAGTGGTTGATAGATTCTCTGCTTCACAGGACCTCTTAGGAATCAGAAAGAGGAGGAGGATTTCTGTGTTCAGTTCATCATCTCTTGGAGAATTCTGGATTCACCAAGGGGACCCATCAGCTGAGACAGACCTTCTTTCTGTTGAGTCTGCTCTCTGTCGAAACAAACTCGCAACCTATTTCAACAAAATTCGATTCCTTCCGCCGGAATCTTCCTCTAATTTATCTGTTGTTCTACTTACTGCCTTCATATTTGCAGTCTCTTTCTCTCCCTTTCCGTCAATCATGGCACAGGAAGAGAAGAAATCTGACATTCAGAAAATTGGAGACGAAAGCGAACAGATTGAGGAGGCCCTAGAGCTCGTCCTCTTTCAAGTGTCTGAATGTTACGTTTATATAATTCCCCCCAGGAAGAGCGCAGCTTCTTACAGGGCCGATGAATGGGATGTGAACAAATGGGCATGGGAAGGGACATTGAAAGTCATTAGCAAGGAAGAACTATGCATTATAAATCTTGAAGATAGGAACACAGGTGAGCTATATGCTCAGGCATTTTTAAGAAATGGAGAGCTTCATCCTGTGGAGCCCGTCATTGACAGCAGCAGATATTTTGTTCTTCGCATAGAAGAGAACATAGGTGAGCCCCGATATCTAAATTTTTCTTTGCTTCTTTTTCTTCCTTCGTATTGTGCAAGACCTGAGCAGGAAAAGAAATCCTCCTAA 1428 0.4307 MELTESSKIMEGFDWSSGICGNASEKSGSHGFTVNSGVIENGFASSSSLVLYNQIGELVEASVKDRNKGLSSERSVAALKNHSEAERRRRARINAHLDTLRTVIPGANKMDKASLLAEVITHLKELKGNAAQACEGLMVPKDSDEIRVEEQEGGSNGFPYSIRASLCCEYKPGLLSDIRQAIEGLHMMIMKAEIATLGGRMKNVFVIISCREHNNIEEDCEYRQFLAGSVHQALKSVVDRFSASQDLLGIRKRRRISVFSSSSLGEFWIHQGDPSAETDLLSVESALCRNKLATYFNKIRFLPPESSSNLSVVLLTAFIFAVSFSPFPSIMAQEEKKSDIQKIGDESEQIEEALELVLFQVSECYVYIIPPRKSAASYRADEWDVNKWAWEGTLKVISKEELCIINLEDRNTGELYAQAFLRNGELHPVEPVIDSSRYFVLRIEENIGEPRYLNFSLLLFLPSYCARPEQEKKSS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0584 475 SMART finulus 83 132 IPR011598 GO:0046983
Alju02g0584 475 Gene3D - 358 457 IPR011993 -
Alju02g0584 475 Gene3D - 73 134 IPR036638 GO:0046983
Alju02g0584 475 Pfam Protein of unknown function (DUF1681) 355 452 IPR012466 GO:0006897|GO:0016020
Alju02g0584 475 Pfam Helix-loop-helix DNA-binding domain 81 126 IPR011598 GO:0046983
Alju02g0584 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 126 IPR011598 GO:0046983
Alju02g0584 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 128 IPR036638 GO:0046983
Alju02g0584 475 SUPERFAMILY PH domain-like 351 452 - -
Alju02g0584 475 PANTHER TRANSCRIPTION FACTOR BHLH30 43 260 IPR045847 GO:0003700|GO:0006355
Alju02g0584 475 CDD PHear_NECAP 357 448 IPR012466 GO:0006897|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0584 Alju-ChrAlju02 4268276 4272232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0584 44 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 37.445 1.22e-31 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g0584 DUF1681 5.2e-28 CL0266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0584 02 4268276 4272232 Alju02g0584 02 4268276 4272232 ECH