Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0576 ATGAAGAACACAGGGGGAGAGATAGTTCAAGTCCAAGGAGGCCACATTGTTCGATCCGCTGGTAGAAAAGATCGTCACAGTAAGGTTTACACTGCAAAAGGTCCTCGTGACCGTAGGGTTAGACTCGCAGCTCATACTGCCATTCAATTCTACGATGTTCAAGATCGTCTCGGCTATGACCGACCCAGCAAGGCCGTGGATTGGCTCATCAAGAAGGCCAAATCCGCCATTGACAAGCTCGCAGAGCTTCCTCCTTGGCATCCAGCTGCTAACACTACTACTAATACCGAAGAAGCTCCTGAAATAGGAATTACAGAGGAAACAGAGTCCTCTGGTTACAACATTCAGCTTCAGAGGCAGTTTGGTGAGAACCCAGATAACCATTCTGCTTTTATTTCGTCGCAGATGGGTACTGACGCCATAGCTTTCTTCCCCACCACCACAGCCACTATGAGTTCCTCCATCAATTTTCAGAACTACCCAGCTGATATAATCTCCAGAACTATCAACCCCAATGAAGATCTTGGACTTTCTCTTCATTCGTTTCAAGACCCAGGTCTGATTCATGGCCAGTCATCACAAGGAGATGCGAATCCCGGAGGATTTGTGACTTGGAACAACGACGCTTCTATGTTGGTGGGGCAAGGTTCAACATTTTCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCATGGAATGACATTGCAATGACTTGTTCTTCTTCAGAGCAACAGAACAAGTCCCAAGCTTCAATCTTTGGGAGCAGGTTTCTGTCTGATGGAATGGGAATTCCTGGGTTCTGCATTCCCGCAAGAATTCATGGTGAGGAGGACGATGGAATTGCTTCTGATCATAGGCCATCTTCTTCTGCTTCTCCTAATTCTCGTCACTGA 894 0.4709 MKNTGGEIVQVQGGHIVRSAGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWHPAANTTTNTEEAPEIGITEETESSGYNIQLQRQFGENPDNHSAFISSQMGTDAIAFFPTTTATMSSSINFQNYPADIISRTINPNEDLGLSLHSFQDPGLIHGQSSQGDANPGGFVTWNNDASMLVGQGSTFSQRGTLQSSFSAWNDIAMTCSSSEQQNKSQASIFGSRFLSDGMGIPGFCIPARIHGEEDDGIASDHRPSSSASPNSRH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0576 297 Pfam TCP family transcription factor 21 112 IPR017887 -
Alju02g0576 297 MobiDBLite consensus disorder prediction 277 297 - -
Alju02g0576 297 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Alju02g0576 297 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 238 IPR005333 GO:0003700
Alju02g0576 297 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0576 Alju-ChrAlju02 4206493 4207386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0576 6 297 TCP Transcription Factor Family AT3G15030 40.648 2.72e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju02g0576 TCP 3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0576 02 4206493 4207386 Alju02g0576 02 4206493 4207386 ECH