Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0553 ATGCTCGCGGTGTCACCTCTTGGAAGCACCAGAGATGAAGAAGGGCAAGGAGAGATGGAGATATTTTCGTTGGAGTCCCATGAATTCGGCGACCTCTCCGATGGGAATTTATTGGAAAGCATCAGCTTCGACGACATCTTTGCCGGCATCAACGACGCAGATGTCTTACCGGATCTGGAAATGGACCCCGAGATCTTCGCCGACTTCTCCCTTAGCGCCGGCGAGGACTCGGAAATGGCCACGTCATCGGTCTCGGTGGAAAACGTCAATAATAAAGTTGACCAGAATATAAGGACGACGTCGACGAAGAAAGAAGAGGAAGATAAAGCGTCTTCGGATTCGGATTCGGGTTCCGGTTCCGGTTCGAATTCCGGAGAGGAGATAGTGAGCAAAAGGGATGAATCCGTGGAGGTTAAGTCGTCTCAGAAGGAAGGTGACAAGGGAAGAAAATCATCAGCCGAGTCGAAGAATTGTCAAGGCAAGAGAAAAGTGAAGGTGGACTGGACTCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAACTAGGAGTAGATAAGGCGGTACCTTCGAGAATATTGGAAATTATGGGAATTGATTGTCTCACTCGCCACAATATAGCCAGTCATCTTCAAAAATACCGATCCCACAAGAAGCATCTGTTGGCACGTGAAGCAGAAGCAGCAAACTGGAGTAAAAGAAGACAGTGTTATGGTACAGGAGGAGGCAAGAGAGAGGGAAGCCCTTGGCTCGCCGTAGCACCACCGACAATTGGTTTCCCTCCGGTGATGCCGCCGCCAATGCAGCATTTCAGAGCTCTACATGTGTGGGGCCATCCCACCATGGACCACTCCTTCATGCCTCTGTGGCCTAAGCATCTCCCTCCACACTCCCCTTCGCCCCCTCCCATCGCCTGGGCGCCACCCACTCCTCCGCCTCCTGATCCTTCTTCCTACTGGCACCAACCCGCTCCCAATGCACTAACGCCAGGAACACCTTGCTTTCCACAGCCTCTGACTACAACGAGATTTCCCTCTCCAACTGTCTCGGGAATCCCACCGCATGCGATGTACAAAGTAGATCCGGGCATCTCCGTCCCCACCGCCCAACCCACTCCTCGCCCACTCATTCATTCTCATCCGTCAAAGGAGAGTGTAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCACTTCCTCTTGGGCTTAAAGCTCCAGCGCTTGACAGTGTGGTGGGTGAATTACAGAGACAAGGAATTCCCAAAATTCCACCCTCTTGTGCTTGA 1293 0.5205 MLAVSPLGSTRDEEGQGEMEIFSLESHEFGDLSDGNLLESISFDDIFAGINDADVLPDLEMDPEIFADFSLSAGEDSEMATSSVSVENVNNKVDQNIRTTSTKKEEEDKASSDSDSGSGSGSNSGEEIVSKRDESVEVKSSQKEGDKGRKSSAESKNCQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHKKHLLAREAEAANWSKRRQCYGTGGGKREGSPWLAVAPPTIGFPPVMPPPMQHFRALHVWGHPTMDHSFMPLWPKHLPPHSPSPPPIAWAPPTPPPPDPSSYWHQPAPNALTPGTPCFPQPLTTTRFPSPTVSGIPPHAMYKVDPGISVPTAQPTPRPLIHSHPSKESVDAAIGDVLSKPWLPLPLGLKAPALDSVVGELQRQGIPKIPPSCA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0553 430 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 429 IPR044825 GO:0003700|GO:0045893
Alju02g0553 430 FunFam Two-component response regulator 159 222 - -
Alju02g0553 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 219 IPR017930 -
Alju02g0553 430 Gene3D - 160 221 - -
Alju02g0553 430 MobiDBLite consensus disorder prediction 80 97 - -
Alju02g0553 430 MobiDBLite consensus disorder prediction 297 318 - -
Alju02g0553 430 NCBIfam myb-like DNA-binding domain, SHAQKYF class 163 218 IPR006447 GO:0003677
Alju02g0553 430 MobiDBLite consensus disorder prediction 127 163 - -
Alju02g0553 430 MobiDBLite consensus disorder prediction 98 113 - -
Alju02g0553 430 Pfam Myb-like DNA-binding domain 166 215 IPR001005 -
Alju02g0553 430 MobiDBLite consensus disorder prediction 80 163 - -
Alju02g0553 430 SUPERFAMILY Homeodomain-like 161 220 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0553 Alju-ChrAlju02 4062296 4065745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0553 1 295 G2-like Transcription Factor Family AT5G44190 43.831 2.86e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju02g0553 Myb_DNA-binding 5.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0553 02 4062296 4065745 Alju02g0553 02 4062296 4065745 ECH