Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju02g0543 | ATGACTGGCAAAGAAATCCTCATCAAGATGAAGGCCAAGGCTGGGTTTGGGACGTCAGCAGCTGACACAGGAAAAGGAAAAAGCAAAATGTTAAAGCATATCATACATGGGTTTCACTTAATGAAGGGAAAATCAGGCCATGCTATGGAAGATTATCTAGTTTCAGAATTCAAGCAAGAAAAGGACAAAGAGTTGGGATTGTTTGCTATATTTGATGGCCATTTGGGTCATGACGTTGCAAGCTATTTGCAGAATCACCTTTTTGACAACATCTTGAAACAGCCTGACTTCTGGAATGACCCAGAAAGTGCAGTAAGGAACGCTTATCTTGAAACAGACGAGAAAATACTGGAACAAGCACTTGTCTTGGGACGAGGAGGATCAACTGCAGTGACTGCAATACTTATTAATGGTCGAACGCTAGTAGTAGGGAATGTTGGAGACTCTCGAGCTGTAATTTGCAAGAACGGAGAGGCAGAGCAACTATCAGTTGATCATGAGCCAAGCAAGGAAAAAAGGTTGATCGAGAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGGGATGTGCCTCGTGTAGATGGGCAGCTAGCAGTAGCCAGGGCATTTGGTGATAAGAGCTTGAAGATGCATCTAAGTTCAGAACCTGATGTGGTGATAAAGGAGATAGATGATGACACAGAATTCCTTATGCTAGCAAGTGATGGAATATGGAAGGTAATGTCAAACCAGGAAGCAGTGGAGTGTATCAGACAAATAAAGGATGCTCAGGCGGCAGCGAAGCGCTTGATAGAGGAGGCCGTTGGTAGGAAGAGTAAGGATGACATATCCTGCATTGTTGTGAGGTTCCAATGA | 852 | 0.4401 | MTGKEILIKMKAKAGFGTSAADTGKGKSKMLKHIIHGFHLMKGKSGHAMEDYLVSEFKQEKDKELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNDPESAVRNAYLETDEKILEQALVLGRGGSTAVTAILINGRTLVVGNVGDSRAVICKNGEAEQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVIKEIDDDTEFLMLASDGIWKVMSNQEAVECIRQIKDAQAAAKRLIEEAVGRKSKDDISCIVVRFQ | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju02g0543 | 283 | CDD | PP2Cc | 34 | 282 | IPR001932 | - | |
| Alju02g0543 | 283 | FunFam | Probable protein phosphatase 2C 39 | 25 | 283 | - | - | |
| Alju02g0543 | 283 | SMART | PP2C_SIG_2 | 40 | 282 | IPR001932 | - | |
| Alju02g0543 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - | |
| Alju02g0543 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - | |
| Alju02g0543 | 283 | SMART | PP2C_4 | 27 | 280 | IPR001932 | - | |
| Alju02g0543 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
| Alju02g0543 | 283 | SUPERFAMILY | PP2C-like | 31 | 282 | IPR036457 | - | |
| Alju02g0543 | 283 | Coils | Coil | 245 | 265 | - | - | |
| Alju02g0543 | 283 | PANTHER | PROTEIN PHOSPHATASE | 28 | 282 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju02g0543 | Alju-ChrAlju02 | 3996452 | 3998426 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju02g0543 | 1 | 283 | PP2C-type Phosphatase Gene Family | AT3G15260 | 70.588 | 1.01e-145 | 409 |