Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0542 ATGGATGAGACCAAACCAAAGACGGTGGTGAAGAGGGCGGCCTTGGGGGATTACGACGACAAGAAAAATGGATTCTTGCTGGGGGAAGATGACCTGAGGAAGACGAAAGTGTCCGTGAAGAAAGGATCTGCCGGCGGCGGAGGGAGTGGTCTGCGGTGTTGCCAGGCGGAGAACTGCTCGGCGGAGCTCAGTGATGCGAAGCCGTATCATAAGAGGCACAAGGTGTGCGAATATCATGCCAAGGCTCAGGAAGTGATTGTTTCCGGCATCCGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTAGGTGAGTTTGATGAGACGAAAAGAAGTTGTAGGAGGCGTTTGGCTGGGCACAACGAACGAAGAAGGAAGAGCTCAGTGAGTGAGACTGAGGCAGAAGGGTCGTGCCAGAAAAGAACAGGTACTCATCAGCATAAGGACAGGGTTTATGGTGGCGGTGGCGGTGGCGATGATAGAGGCAGATCAATTCAGATCACTATATAA 513 0.5185 MDETKPKTVVKRAALGDYDDKKNGFLLGEDDLRKTKVSVKKGSAGGGGSGLRCCQAENCSAELSDAKPYHKRHKVCEYHAKAQEVIVSGIRQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVSETEAEGSCQKRTGTHQHKDRVYGGGGGGDDRGRSIQITI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0542 170 ProSiteProfiles Zinc finger SBP-type profile. 51 128 IPR004333 GO:0003677
Alju02g0542 170 SUPERFAMILY SBT domain 52 132 IPR036893 GO:0003677|GO:0005634
Alju02g0542 170 Gene3D - 45 115 IPR036893 GO:0003677|GO:0005634
Alju02g0542 170 Pfam SBP domain 54 127 IPR004333 GO:0003677
Alju02g0542 170 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 39 154 IPR044817 GO:0003677
Alju02g0542 170 MobiDBLite consensus disorder prediction 139 157 - -
Alju02g0542 170 MobiDBLite consensus disorder prediction 119 170 - -
Alju02g0542 170 FunFam Squamosa promoter-binding-like protein 14 46 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0542 Alju-ChrAlju02 3992800 3993725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0542 27 138 SBP-box Gene Family AT1G53160 59.821 3.37e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju02g0542 SBP 1.3e-31 No_clan