LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g0540	ATGGCTTCGGTTTCATCCACATCCTTTGTCACTTGTGTGCTATTCCTTCTTCTCTTGCACTCATCTTCCATCTTTAACAATCTTTGTGCAGCAAAACACGGTGCTGCCACCAACAGTCACAACCGTCACCACCACCACCATACCCAGAATCCTCCGTTAAACCCACGGCTTTACCGAGCTTTTCTTGCTCTCCAAGCATGGAAGCGCGTTATATACTCTGACCCACGTAACTTTACTCAAAATTGGGTAGGCCCTTCAGTCTGCAACTATGATGGTGTTTATTGCACTCGATCACTAGATGATCCTAAAGTCACGGTTGTGGCTGGCATTGATCTTAATTTTGGAGACATAGCTGGGTTCTTACCCAATGAACTAGGCCTTCTCTCTGATCTCGCTCTTCTTCATCTCAATAGTAATCGTTTTTGTGGCATCCTCCCAATGTCCCTAAGCAATCTTACTCTGCTCTATGAGCTTGATCTTGGCAACAACAGATTTGTAGGGCCATTTCCTTCTGTTGTGCTTTGCCTTCCCACACTTCGATATCTTGACATTCGCTATAATGAGTTTGAAGGGCCATTGCCTCCTCAACTATTCAACAAAACCTTTGATGCCATTTTCCTAAACAACAATCGCTTCACTAGTTCAATCCCAGCAAATTTAGGCCAAAGCTCTGCCTCTGTCATCGTGTTTGCTAATAACAAATTTGGAGGGTGTCTCCCAGAGAGCATAGTCAACTTTGCTGATACCTTGGAAGAGCTGGTTTTAATAAACACAAGTTTGTCTGGTTGTTTGCCGCAGCAAGTTGGGTTTCTGTATAAATTAAGAGTGTTGGATGTGAGCTTTAACAAACTTGTTGGTCCTATACCTTACAGTCTTGCAGGGTTGTCTCATTTGGAGCAGCTGAATTTGGGACATAATATGTTGAGTGGTGCAGTGCCAATGGGGGTTTGTGAGCTTCCAAACTTGAACAACTTCACGTTCTCTTATAACTTTTTCTGCGAGGAAGAGGGTATTTGTCAGAATCTGACGTCTAAACACATCGTGTTTGATGATCGCCGGAACTGCTTGCCGGAGAAGCCATTGCAGAGGAGCCAAAAGGAATGCAATGCAGTACTTGAGCACCCAGTTGATTGTTTTGAGCTTTGCTGTGTTGGAGGAGTCAGTTCTGGTTCAGTGGCTACCCCACCTGCTGCTCTAACTCCAATAGGAATGCCTGTATCTTCACCTATTACCGCACCACCATATCCATGA	1251	0.4452	MASVSSTSFVTCVLFLLLLHSSSIFNNLCAAKHGAATNSHNRHHHHHTQNPPLNPRLYRAFLALQAWKRVIYSDPRNFTQNWVGPSVCNYDGVYCTRSLDDPKVTVVAGIDLNFGDIAGFLPNELGLLSDLALLHLNSNRFCGILPMSLSNLTLLYELDLGNNRFVGPFPSVVLCLPTLRYLDIRYNEFEGPLPPQLFNKTFDAIFLNNNRFTSSIPANLGQSSASVIVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNKLVGPIPYSLAGLSHLEQLNLGHNMLSGAVPMGVCELPNLNNFTFSYNFFCEEEGICQNLTSKHIVFDDRRNCLPEKPLQRSQKECNAVLEHPVDCFELCCVGGVSSGSVATPPAALTPIGMPVSSPITAPPYP	416

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g0540	416	FunFam	Leucine-rich repeat extensin-like protein 1	61	222	-	-
	Alju02g0540	416	Pfam	Leucine rich repeat	249	308	IPR001611	GO:0005515
	Alju02g0540	416	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	15	390	-	-
	Alju02g0540	416	SUPERFAMILY	L domain-like	61	344	-	-
	Alju02g0540	416	Gene3D	Ribonuclease Inhibitor	61	231	IPR032675	-
	Alju02g0540	416	Gene3D	Ribonuclease Inhibitor	232	366	IPR032675	-
	Alju02g0540	416	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	240	335	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g0540	Alju-ChrAlju02	3982917	3984167	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g0540	54	409	Trihelix Transcription Factor Family	AT2G15880	53.221	2.64e-135	403