Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0529 ATGGATCATCTTCATCAGCAACGAGTTCAAGATCCTTCACAAACCAAGATCGAAAGAAGGCTCATAGAGAAAAACAGAAGAAACCAGATGAAGATCCTCTACTCCAAACTCAATTCCCTTCTCCCAAACTTCAACCCTAAGCAAATGATTCCGCTTCCTGATCAGATAGACGAGGCCATAAACTATATAAAGAGTTTAGAGGCAAAGGTGAAGATGGCTCAGGAGAAGAAAGAGAGGTTAATGATGGGAAAGAAAAGGTCACATGCTTGTTGTAGCTCTAGTTCTTTTGAGACAGAGAGAAAGAGAAGCCTGATGAACTCACCACAAATTCAGATTCATGAAATGGGTTCGTCACTAGAAGTAGTTCTGATTAATTGTTTGGATAATCAGTTCATTTTCCATGAGATTATTTGCATACTGCACCAAGAGAACGTGGAGGTCGTAAGCGCCAATTCCTCACTCGTTGGAGATTCCATGCTAAATGTTGTACACGCACAGATTCAGCCATCATTGTATGAATTTGGAGCTACCAAAGTAATTGAGAGACTGAAAAGGTTTGTGTATGGATCTACCAGTGATGTAGAAACAGTACAGCCAGCCGAGTTGCAGGATTATTTCCTAATTGGTACGGATGCATGGGACTTCTTTTAA 651 0.4071 MDHLHQQRVQDPSQTKIERRLIEKNRRNQMKILYSKLNSLLPNFNPKQMIPLPDQIDEAINYIKSLEAKVKMAQEKKERLMMGKKRSHACCSSSSFETERKRSLMNSPQIQIHEMGSSLEVVLINCLDNQFIFHEIICILHQENVEVVSANSSLVGDSMLNVVHAQIQPSLYEFGATKVIERLKRFVYGSTSDVETVQPAELQDYFLIGTDAWDFF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0529 216 Coils Coil 56 83 - -
Alju02g0529 216 SMART finulus 20 72 IPR011598 GO:0046983
Alju02g0529 216 FunFam Transcription factor bHLH162 8 92 - -
Alju02g0529 216 Pfam Helix-loop-helix DNA-binding domain 18 67 IPR011598 GO:0046983
Alju02g0529 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 85 IPR036638 GO:0046983
Alju02g0529 216 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 188 - -
Alju02g0529 216 Gene3D - 5 95 IPR036638 GO:0046983
Alju02g0529 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 66 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0529 Alju-ChrAlju02 3905708 3906714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0529 17 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.000 4.50e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g0529 HLH 1.1e-05 No_clan