Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0524 ATGGGTTGCATAAGCTCCAAGACTTCAGCTGTGGAAGACAGCCGAGAAGGTTTGACGACGAAACTGTCATCATTGAGCAAAAGGTCATCGGAGCTGAATGTTTCACGGTTGAATTCATCAAAAAGGGTTGAGGGAGTTTGGACCAAAAATGTGCTAGGTGCCAGAGATGTTAAAGTTTCGTTGATTAGCAAGAAACCCAACGGTTCAGTTAAGTTTTATGGTGATCAAATTGGGGAGGAGAAAATTGAGAAACCCGAATATACCGTTCTTAATCATCCTGGTGTCGGTAAAGTACCAAAGGCTGCAGAAGGAGAACAAGTTGCGGCAGGATGGCCTACTTGGCTATCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCTCGGAGTGCTAATACTTTCGAGAGGTTATATAAAATTGGCCAAGGAACATACAGTTCTGTTTATAAGGCACGTGATGTGATTCACCAAAAGACAGTTGCTTTGAAGAAAGTACGCTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAAATCTTTGTTCTGCGTTGGCTTGACCATCCTAACGTGATAAAGTTAGAGGGCTTGATAACATCCCAGACATCTCGCAGCTTGTATCTTGTTTTTGAGTATATGGAACATGATCTTACAGGACTTGCTTCACGTCCTGGCATTAAATTTTCAGAACCACAGATTAAGTGCTACATGCAGCAGCTTCTCAGTGGATTGGATCATTGTCACAGTCATGGTGTCCTCCACCGGGACATAAAGGGGTCAAATCTTCTCATTGACAATAATGGCATCCTAAAGATTGCAGATTTTGGTTTGGCAAGCTTTTTTGACCCCCATCACAGTGTTCCATTGACCAGCCGAGTGGTGACTCTTTGGTATAGGCCGCCAGAACTTTTACTTGGAGCATCTCATTATGGTGTTGCAGTGGATCTGTGGAGTGCTGGTTGTATACTGGGAGAACTATATTCTGGCAGGCCCATATTGCCAGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCATCTGAAGATTACTGGCTTAAATTGCGGTCGCCACATTCAACAGTATTCAAGCCTCCACACCATTATAGACGTTGTATTGCCGAAACATTCCAGGAATATCCACCTGCTGCTATGAGGCTAATAGAGACCCTACTTTCCATAGATCCTTCACATCGAGGAACTGCAGCTACTGCTTTAAAAAGTGAGTTCTTTACCATGGAACCCCTTGCTTGCGATCCTTCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCTAAGTTGCGAGATGAAGCAACCAGAAGGCAAAGAGTCGTGGGAGGACAGGAGCAGAAAGTCAGCGTGGGAGTTAGACCAGAAAAAGGACTTCAGGCGCTTGCAGCAAATAACAATGCTGACCCACGCATGTCAATGCAGCAAGGACGTCATTCCAGCTCAAAGAGTCGAAGTGAATTGTTCAATCCTCCCAGAGAATCTGCTTCGGGGTTGTTGGTTTATCCACATAAACAGTCAGACAATGCTAAGGAAATGGAAAACAATTTCTCTGGTCATCTGTACAAGAGGCCTTCACATTCAGGTCCATTGGTTCAGGGTCCTGGCTGGGTAAAGGTTGGGAAGGACATGGATGAGCAGCATCTTGGTTCCAGCAGAGTCAACCTGTCAAAACTATCAAGTTTAGTGGCATCCAGGACTTCAATGTCTGAAGACCAGGAGGAAAAATCACATTCCTCACGGCCTAGAAAAACAGTTGATGTACGAAAATCTGTGGAATCAACTAGTGGATCAGAGTTGAGAAGAAGGCAGGCTCAAAAACACCAGTCTCAGCGAATTGATCTGTGTCATGTAGAACATGGAAAGACCCCACCTAAAGAATCAACTCCGGAAGGGTATGGCAGGGAAAACAAGATATATCTTTCTGGTCCATTGATGGCATCGTCAAACAAGATGGATCAGATGCTCAAAGAACATGATCGAAAGATCCAGGAATATTCAAGACGAGCTAGAGTTGACAAGTCAAGAGGTGAAAAAGTTCGAGCCAAGCATAAGTAG 2094 0.4408 MGCISSKTSAVEDSREGLTTKLSSLSKRSSELNVSRLNSSKRVEGVWTKNVLGARDVKVSLISKKPNGSVKFYGDQIGEEKIEKPEYTVLNHPGVGKVPKAAEGEQVAAGWPTWLSSVAGEAIKGWIPRSANTFERLYKIGQGTYSSVYKARDVIHQKTVALKKVRFDNLDPESVKFMAREIFVLRWLDHPNVIKLEGLITSQTSRSLYLVFEYMEHDLTGLASRPGIKFSEPQIKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSAGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRSPHSTVFKPPHHYRRCIAETFQEYPPAAMRLIETLLSIDPSHRGTAATALKSEFFTMEPLACDPSSLPKYPPSKEIDAKLRDEATRRQRVVGGQEQKVSVGVRPEKGLQALAANNNADPRMSMQQGRHSSSKSRSELFNPPRESASGLLVYPHKQSDNAKEMENNFSGHLYKRPSHSGPLVQGPGWVKVGKDMDEQHLGSSRVNLSKLSSLVASRTSMSEDQEEKSHSSRPRKTVDVRKSVESTSGSELRRRQAQKHQSQRIDLCHVEHGKTPPKESTPEGYGRENKIYLSGPLMASSNKMDQMLKEHDRKIQEYSRRARVDKSRGEKVRAKHK 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0524 697 PANTHER CELL DIVISION PROTEIN KINASE 132 424 - -
Alju02g0524 697 MobiDBLite consensus disorder prediction 581 645 - -
Alju02g0524 697 CDD STKc_CDK9_like 134 418 - -
Alju02g0524 697 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0524 697 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Alju02g0524 697 MobiDBLite consensus disorder prediction 665 689 - -
Alju02g0524 697 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Alju02g0524 697 Coils Coil 661 681 - -
Alju02g0524 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Alju02g0524 697 MobiDBLite consensus disorder prediction 478 503 - -
Alju02g0524 697 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0524 697 MobiDBLite consensus disorder prediction 576 697 - -
Alju02g0524 697 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Alju02g0524 697 MobiDBLite consensus disorder prediction 531 550 - -
Alju02g0524 697 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Alju02g0524 697 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g0524 697 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Alju02g0524 697 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Alju02g0524 697 MobiDBLite consensus disorder prediction 450 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0524 Alju-ChrAlju02 3844640 3849149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0524 126 453 Core Cell Cycle Gene Families AT5G10270 49.573 3.77e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju02g0524 Pkinase 5.1e-66 CL0016