Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0510 ATGGCCATGGCTGGTAGCCTCTCAGAGTGTGCCGCCATCAAACTGTCGGCGACGCTCCACCCGCTTCCCAACTGTTTTCCCGCCTTCTGCGCCCGAGGGAGCTCAGTTTTAGACCTTTTAGCGGCGGCGCCTTCCCTTTATTACACAATGCACTACCGCCGCAGCTCCTCCGTACAGTTTTTGCGCTTCTTCTTTTACTTGGCATTGAAAGCTTCCCTAGTATGCTCTCAGGAACAGCTTCAGGACCACCTCATCCCACTCCCGGACCTACATTGGACCCCGGGTATGGCCACCTGGTATGGAGACCCCGAAGGCGACGGTAGTACCGGGGGGGCATGCGGGTACGGTTCCTTAGTGGACGTGAGGCCGTTCAGAGCAAGGGTAGGAGCAGTGGGGCCCGTACTGTTCAAGAATGGCGAAGGGTGTGGAGCGTGCTATAAAGTGAAGTGCTTGGACGACAGCATTTGCTCGAGGCGAGCCGTGACGGTGATAATTACCGACGAGTGTCCGGGCTGCCCCACCGACCAGACCCATTTCGACCTCAGTGGCTCCGCCTTTGGGCGGATGGCTATTGCCGGTGAACATGGTCAACTCAGGGACCGAGGTCAAATCCCCGTCATTTACCGCCGAACACCATGTAAATATCGAGGCAAAAACATTGCCTTCCATGTGAATGAAGGTTCTACGCCTTTTTGGCTTTCACTTTTGGTGGAATTTGAGGATGAAGAAGGAGATATAGGCTCTATGCATATTCAAGAAGCAGGGTCAGTCGAGTGGCTAGAGATGAATCATCTCTGGGGTGCAAATTGGTGCATTATTGGTGGGCCTTTGAGGGGACCATTTTCTGTGAAACTAAGCACATCCACTGGGAGATCTCTGTCTGCCAGAGGTGTTATTCCAGGCAGCTGGTCTCCAAAAGCTACTTACACATCCCGTCTCAATTTCTACCCTTAG 954 0.5367 MAMAGSLSECAAIKLSATLHPLPNCFPAFCARGSSVLDLLAAAPSLYYTMHYRRSSSVQFLRFFFYLALKASLVCSQEQLQDHLIPLPDLHWTPGMATWYGDPEGDGSTGGACGYGSLVDVRPFRARVGAVGPVLFKNGEGCGACYKVKCLDDSICSRRAVTVIITDECPGCPTDQTHFDLSGSAFGRMAIAGEHGQLRDRGQIPVIYRRTPCKYRGKNIAFHVNEGSTPFWLSLLVEFEDEEGDIGSMHIQEAGSVEWLEMNHLWGANWCIIGGPLRGPFSVKLSTSTGRSLSARGVIPGSWSPKATYTSRLNFYP 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0510 317 Pfam Lytic transglycolase 133 207 IPR009009 -
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 222 237 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 168 183 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 287 304 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 190 205 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 130 141 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 PRINTS Major pollen allergen Lol pI signature 238 253 IPR005795 GO:0005576|GO:0019953
Alju02g0510 317 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 231 311 IPR007117 -
Alju02g0510 317 FunFam Beta-expansin 3 215 316 - -
Alju02g0510 317 CDD DPBB_EXPB_N 92 213 - -
Alju02g0510 317 PANTHER EXPANSIN-B3 73 315 - -
Alju02g0510 317 FunFam Expansin B3 77 214 - -
Alju02g0510 317 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 110 218 IPR007112 -
Alju02g0510 317 SMART dpbb_1 128 208 IPR007112 -
Alju02g0510 317 SUPERFAMILY PHL pollen allergen 218 311 IPR036749 -
Alju02g0510 317 SUPERFAMILY Barwin-like endoglucanases 91 217 IPR036908 -
Alju02g0510 317 Gene3D - 88 213 IPR036908 -
Alju02g0510 317 Gene3D - 214 312 IPR036749 -
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 259 273 IPR007118 GO:0005576
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 109 127 IPR007118 GO:0005576
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 201 217 IPR007118 GO:0005576
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 91 106 IPR007118 GO:0005576
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 297 311 IPR007118 GO:0005576
Alju02g0510 317 PRINTS Expansin/Lol pI family signature 132 150 IPR007118 GO:0005576
Alju02g0510 317 Pfam Expansin C-terminal domain 220 300 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0510 Alju-ChrAlju02 3757808 3760782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0510 91 272 Expansin Gene Family AT4G28250 72.527 1.06e-92 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0510 02 3757808 3760782 Alju02g0510 02 3757808 3760782 ECH