Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0504 ATGGCCACCGCGAATAACAGTGGTAAGTCCACCAAGGGTGGTGGAGAAAGCCGAGATTGGGAGATTGAAAGGGGTAAAGATGTCGACTTGAGCGGCGAGAGGCGGCAATGGAAGCCAGTTTTTGAGGATGCTTCCGTGTCAAACAGGCCTCTCAAGAAAATCCGAAGCCCCCAACGTCAAAACTCCAACCAAAATCAATCCTCTGTTTCCATTCTGCCACATCCTCCCTCCTCCCTTCCTTCTTCGTCTTCCAGAATCGTCTTCCCTTTTGCCTTCGACGGCTCTCAACAGCCTCTGCAATTTCCCCACCAACAATATGGCTCTGCCAATTTGCCGGCGTTTCGCCCACCGTTTCAGGCGACGCAAAATCAGCAGCAGATGTTGTCTTTTGGGTCCCAACAGCCAAACATGGTGTACCCACAGTTCTTAGCCCAAGACCCTGGAATCGCACCCCAGCAGCAACTCGTTCAGTATTGGAGAGACGCATTGAATCTGAGCCCGAGAGGAAGGACGATGATGATGATGAACAACGTAGGGCCGGACGGGAGGCCAATGTACAGGCCCCCTCCTCAGCCTATAAACGCTACGAAGCTCTACAGAGGAGTGAGGCAACGGCATTGGGGAAAATGGGTGGCTGAGATTCGTCTTCCTCGAAACAGGACTCGCCTCTGGCTGGGAACATTCGACACAGCTGAAGATGCTGCCCTGGCTTATGATCGCGAGGCCTTTAAGCTGAGAGGAGAGAATGCGAGGCTCAATTTCCCAGAGCTCTTCCTCAATAAGGATAAGCCTTCATCATCGACAGCCCCAGATTCATCTCCTTCTTCTCCCTCCACTCCTCATCAAGGTTCAACGTCGAAGCAAACTGACTCTGCTCCAGAAGGTTTCATTGAGGAGGAGAAGCCTCCGCAACCGCCACCGCCGGAAGAGAACACCGACAATGATTCTGGAATTGGGTCGAGTGACCTTACAATGAGCGACGAAGTACAGGCAGCATCTAATACTGGAACAGGGGAGGGCACTTCGGCGGCATCGCAGGAACTGGTTTGGGGAGAAATGGCGTCTTGGTTCAATGCAATTCCGGCGGGTTGGGGTCCAGGTAGCCCTGTGTGGGACGATTTGGACACGTTTCAGTCGCAGCTTCCTTTTATCAATCCCAATCACCATGAATTTAATGTTGCAGATGCTCACAGACAGCAAGAAGAAAACACAGGACCATCAGATTCTTCCACTTCCTCCTCTTCTTGTCCCCTGAGACCCTTCTTCTGGAAAGGTCAAGATTGA 1284 0.521 MATANNSGKSTKGGGESRDWEIERGKDVDLSGERRQWKPVFEDASVSNRPLKKIRSPQRQNSNQNQSSVSILPHPPSSLPSSSSRIVFPFAFDGSQQPLQFPHQQYGSANLPAFRPPFQATQNQQQMLSFGSQQPNMVYPQFLAQDPGIAPQQQLVQYWRDALNLSPRGRTMMMMNNVGPDGRPMYRPPPQPINATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSSSTAPDSSPSSPSTPHQGSTSKQTDSAPEGFIEEEKPPQPPPPEENTDNDSGIGSSDLTMSDEVQAASNTGTGEGTSAASQELVWGEMASWFNAIPAGWGPGSPVWDDLDTFQSQLPFINPNHHEFNVADAHRQQEENTGPSDSSTSSSSCPLRPFFWKGQD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0504 427 MobiDBLite consensus disorder prediction 260 292 - -
Alju02g0504 427 ProSiteProfiles AP2/ERF domain profile. 198 255 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 MobiDBLite consensus disorder prediction 259 323 - -
Alju02g0504 427 SMART rav1_2 198 261 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 SUPERFAMILY DNA-binding domain 198 256 IPR016177 GO:0003677
Alju02g0504 427 MobiDBLite consensus disorder prediction 14 40 - -
Alju02g0504 427 MobiDBLite consensus disorder prediction 51 82 - -
Alju02g0504 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 374 - -
Alju02g0504 427 Pfam AP2 domain 199 247 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 CDD AP2 197 257 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 MobiDBLite consensus disorder prediction 1 82 - -
Alju02g0504 427 MobiDBLite consensus disorder prediction 398 419 - -
Alju02g0504 427 PRINTS Ethylene responsive element binding protein signature 199 210 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 PRINTS Ethylene responsive element binding protein signature 221 237 IPR001471 GO:0003700|GO:0006355
Alju02g0504 427 FunFam Ethylene-responsive transcription factor 2 197 256 - -
Alju02g0504 427 MobiDBLite consensus disorder prediction 389 427 - -
Alju02g0504 427 Gene3D AP2/ERF domain 198 256 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0504 Alju-ChrAlju02 3722027 3723310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0504 1 373 AP2-EREBP Transcription Factor Family AT2G20880 37.010 6.90e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g0504 AP2 3.1e-13 CL0081