Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0463 ATGGTGAGAAGTCCCTTTTACGACAAAAATGGAGTGAAGAAAGGTGCGTGGAGTAGAGAAGAGGATGAAAAACTGAGAGCCTTTGTTCTGAGACATGGTCATACCAATTGGCGTCAACTCCCCAAGCTTGCAGGTTTAGCGAGGTGCGGAAAAAGTTGCAGACTTCGTTGGATGAACTACCTGCGACCAAATCTAAAGCACGGCAACTACGCTCAAGAGGAGGAGGAACTCATCATCAAATACCACCAACTACTTGGGAATAAATGGTCATTGATTGCTGAGAAACTACCAGGACGAACGGATAATGATATAAAGAACCACTGGCACAGCCACCTCAAGAAGAAATCAAACCACAGTGACACTAGGAAGGAGGGGAAATACTTGAAGACGGCTGAGTATACAGAATCTGAACGGACAAGTGAGTTTGTGGGTTCTGATTCAGAGAGTCATCACCATATACTGGAAAGCTCATGGGTATGGCCGGCTTCTTCAGAAACACGCGATAGCTGCACCCAAGAAAACCTCTCAGACTGGAGCGTTGCACTTGCACAATCAGCCATCAGCTCTTGCGGGGAAGATCAGGACGCTAGTGTTGCTTCCAGCTGGGAAACATCGCACGAATTAATAAGTAGCGATTTCTGGAGAGGACCATTTTTGGTGGAAAATTCATCTGCTTATGACATTTCCCCCCATATGTTTTGGTACCCTTACGAGGGTCCTGATTTGAGTGACCTACACGGGATTCTAGACTGTACAATGAGTTTTCGACAACCAAAGAGGGAAAACTTCGACGATTTGTACAGAAATTTCATCAGTTCTTATCTTGACGTTATTCAGAAAGATATGCAAGACTGCATTGGAATGAATTTAAGGAAAGGAAGGAATTATGGAGATAGGGAAGACATTAGGGTGGAAAAGAGTGGTTTCATGGCCATAGGAATAGTAAACTGGAACATTGCCCCAGTTAAAGCCTTCCTTTTGTTTTACTTGACTTCCTTCTTGTTCCGTAAACCTGAGATACTATTTTTACTAAACGCAATAAGCATATGTGATGTTCGAATCTTCATATTATGCAATGTAAATGCGTGGTTAGGTACTTATGTTCATACTTGCCATACTCCTTTTGCCCTCCCAGACAGTGACAGTACATTTTCAACTTTCAACCACTTGGTCCACTGTGCTCATAGGAGTGGGAATGTGCTCAGGTTTCCATTTGACTTGAAAACCCTATGA 1233 0.4331 MVRSPFYDKNGVKKGAWSREEDEKLRAFVLRHGHTNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKHGNYAQEEEELIIKYHQLLGNKWSLIAEKLPGRTDNDIKNHWHSHLKKKSNHSDTRKEGKYLKTAEYTESERTSEFVGSDSESHHHILESSWVWPASSETRDSCTQENLSDWSVALAQSAISSCGEDQDASVASSWETSHELISSDFWRGPFLVENSSAYDISPHMFWYPYEGPDLSDLHGILDCTMSFRQPKRENFDDLYRNFISSYLDVIQKDMQDCIGMNLRKGRNYGDREDIRVEKSGFMAIGIVNWNIAPVKAFLLFYLTSFLFRKPEILFLLNAISICDVRIFILCNVNAWLGTYVHTCHTPFALPDSDSTFSTFNHLVHCAHRSGNVLRFPFDLKTL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0463 410 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g0463 410 CDD SANT 72 112 IPR001005 -
Alju02g0463 410 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju02g0463 410 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g0463 410 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Alju02g0463 410 CDD SANT 16 61 IPR001005 -
Alju02g0463 410 SMART sant 66 114 IPR001005 -
Alju02g0463 410 SMART sant 13 63 IPR001005 -
Alju02g0463 410 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 179 - -
Alju02g0463 410 Gene3D - 69 141 - -
Alju02g0463 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju02g0463 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g0463 410 Gene3D - 7 67 - -
Alju02g0463 410 FunFam Transcription factor RAX3 7 67 - -
Alju02g0463 410 MobiDBLite consensus disorder prediction 110 130 - -
Alju02g0463 410 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0463 Alju-ChrAlju02 3438291 3442784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0463 1 119 MYB Transcription Factor Family AT1G06180 65.546 1.24e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g0463 Myb_DNA-binding 2.9e-12 CL0123