Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0462 ATGGTGAGAACGCCTTCGTATGACAAGAGTGGACTGAAAAAAGGGACGTGGACGCCCGAGGAAGATCGGAAGCTAATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCCGGTTTGCAGGATTGGCGAGGTGTGGAAAGAGTTGTAGGCTGAGGTGGATGAATTATCTGAGACCCAACATCAAAAGAGGCAATTACACTCCTCAAGAAGAGGATCTCATCATTAAACTCCTCAAAGAGATGGGCAACAGATGGTCGGCGATTGCGGCTCATTTGCCTGGAAGAACTGATAACGAGATAAAGAACCACTGGCACACCACCCTCAAGAAGCGATCTCAACACAACTCCTCCACCCAATCACACCATAAATCTATAAAGTCAAAAGATAATACTTCCACTTCAAACCCACACAGTACTTCTCCTTCTACTTCTTCTCAGTCGTCTGCTTCTTCTTCCCAGATCGAAATCTTGGATTCTGGCCCTTTGTCTCCCCAGTCATATTCCTCCAGCTGCATAACCTCTTCTGCAAATTCGAGTATGCAGGATGACTTGTCTTTTCTGGATGCTCTCACAGAGCCTGAGACCCAGAATTTATATACCCACCTAAATTTGGATGACATGTTTTACGATGATCCAACAGAGACAATAATGCCCGTGCACCCTCCTCCCCATAATCCCGCGGGGTTGGACGATGATTTTGCTTTCCTGGATTCACTTTCTGCGGGATCACTTGACACTTTTCTGATAGGGACACAAATGGCTGACGTGTCTTACCTTCCCACACAACCACAAGCCTCATTGGCCGATGAATTAAAATATCTCTATCCACTTGATGATATAGATCTCTGGAGTCAAAGTGCGTAA 876 0.4612 MVRTPSYDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPQEEDLIIKLLKEMGNRWSAIAAHLPGRTDNEIKNHWHTTLKKRSQHNSSTQSHHKSIKSKDNTSTSNPHSTSPSTSSQSSASSSQIEILDSGPLSPQSYSSSCITSSANSSMQDDLSFLDALTEPETQNLYTHLNLDDMFYDDPTETIMPVHPPPHNPAGLDDDFAFLDSLSAGSLDTFLIGTQMADVSYLPTQPQASLADELKYLYPLDDIDLWSQSA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0462 291 CDD SANT 69 112 IPR001005 -
Alju02g0462 291 FunFam MYB-related transcription factor 13 66 - -
Alju02g0462 291 SMART sant 66 114 IPR001005 -
Alju02g0462 291 SMART sant 13 63 IPR001005 -
Alju02g0462 291 Gene3D - 6 67 - -
Alju02g0462 291 CDD SANT 16 61 IPR001005 -
Alju02g0462 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju02g0462 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g0462 291 MobiDBLite consensus disorder prediction 133 178 - -
Alju02g0462 291 Gene3D - 69 143 - -
Alju02g0462 291 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju02g0462 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju02g0462 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju02g0462 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g0462 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 183 - -
Alju02g0462 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g0462 291 MobiDBLite consensus disorder prediction 112 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0462 Alju-ChrAlju02 3419073 3420145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0462 1 156 MYB Transcription Factor Family AT2G31180 57.051 1.31e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g0462 Myb_DNA-binding 1.8e-12 CL0123